Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RPS27P23-201ENST00000487608 251 ntBASIC1.54□□□□□ -2.16
RFX7Q2KHR2 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
RFX7Q2KHR2 RNU6-1282P-201ENST00000516735 96 ntBASIC1.54□□□□□ -2.16
RFX7Q2KHR2 RNU6-928P-201ENST00000516876 104 ntBASIC1.54□□□□□ -2.16
RFX7Q2KHR2 AP005639.2-201ENST00000527592 928 ntBASIC1.54□□□□□ -2.16
RFX7Q2KHR2 AC010186.2-204ENST00000537668 439 ntBASIC1.54□□□□□ -2.16
RFX7Q2KHR2 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.54□□□□□ -2.16
RFX7Q2KHR2 AC008015.1-201ENST00000555505 465 ntBASIC1.54□□□□□ -2.16
RFX7Q2KHR2 AC243960.4-201ENST00000600532 288 ntBASIC1.54□□□□□ -2.16
RFX7Q2KHR2 AC016542.1-201ENST00000608259 493 ntBASIC1.54□□□□□ -2.16
RFX7Q2KHR2 AP000254.1-201ENST00000609934 520 ntBASIC1.54□□□□□ -2.16
RFX7Q2KHR2 AL773524.1-201ENST00000614065 229 ntBASIC1.54□□□□□ -2.16
RFX7Q2KHR2 ZNF663P-202ENST00000641770 1131 ntBASIC1.54□□□□□ -2.16
RFX7Q2KHR2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
RFX7Q2KHR2 DEFB108F-201ENST00000344638 222 ntBASIC1.53□□□□□ -2.16
RFX7Q2KHR2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RFX7Q2KHR2 SNORD82-201ENST00000365530 70 ntBASIC1.53□□□□□ -2.16
RFX7Q2KHR2 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.53□□□□□ -2.16
RFX7Q2KHR2 MIR525-201ENST00000384978 85 ntBASIC1.53□□□□□ -2.16
RFX7Q2KHR2 MIR613-201ENST00000385248 95 ntBASIC1.53□□□□□ -2.16
RFX7Q2KHR2 PTGES3P2-201ENST00000407942 482 ntBASIC1.53□□□□□ -2.16
RFX7Q2KHR2 RPP40P1-201ENST00000426762 456 ntBASIC1.53□□□□□ -2.16
RFX7Q2KHR2 AC012497.1-201ENST00000429392 575 ntBASIC1.53□□□□□ -2.16
RFX7Q2KHR2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.53□□□□□ -2.16
RFX7Q2KHR2 GTF2IP20-201ENST00000431663 360 ntBASIC1.53□□□□□ -2.16
RFX7Q2KHR2 Z82190.1-201ENST00000454534 490 ntBASIC1.53□□□□□ -2.16
RFX7Q2KHR2 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.53□□□□□ -2.16
RFX7Q2KHR2 AC104164.3-201ENST00000467363 1258 ntBASIC1.53□□□□□ -2.16
RFX7Q2KHR2 DEFB108D-201ENST00000527787 222 ntBASIC1.53□□□□□ -2.16
RFX7Q2KHR2 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.53□□□□□ -2.16
RFX7Q2KHR2 AC080078.3-201ENST00000605407 463 ntBASIC1.53□□□□□ -2.16
RFX7Q2KHR2 AL137246.1-201ENST00000607072 977 ntBASIC1.53□□□□□ -2.16
RFX7Q2KHR2 MIR7157-201ENST00000635801 60 ntBASIC1.53□□□□□ -2.16
RFX7Q2KHR2 SNORD114-27-201ENST00000363766 70 ntBASIC1.52□□□□□ -2.17
RFX7Q2KHR2 RNU6-270P-201ENST00000364131 105 ntBASIC1.52□□□□□ -2.17
RFX7Q2KHR2 RNU1-148P-201ENST00000384472 162 ntBASIC1.52□□□□□ -2.17
RFX7Q2KHR2 MIR934-201ENST00000401241 83 ntBASIC1.52□□□□□ -2.17
RFX7Q2KHR2 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.52□□□□□ -2.17
RFX7Q2KHR2 VN1R36P-201ENST00000414936 291 ntBASIC1.52□□□□□ -2.17
RFX7Q2KHR2 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.52□□□□□ -2.17
RFX7Q2KHR2 AC093106.2-201ENST00000428212 385 ntBASIC1.52□□□□□ -2.17
RFX7Q2KHR2 AL365400.1-201ENST00000431854 640 ntBASIC1.52□□□□□ -2.17
RFX7Q2KHR2 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.52□□□□□ -2.17
RFX7Q2KHR2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.52□□□□□ -2.17
RFX7Q2KHR2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.52□□□□□ -2.17
RFX7Q2KHR2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.52□□□□□ -2.17
RFX7Q2KHR2 AC006390.1-201ENST00000508068 283 ntBASIC1.52□□□□□ -2.17
RFX7Q2KHR2 AC096745.1-201ENST00000509945 370 ntBASIC1.52□□□□□ -2.17
RFX7Q2KHR2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.52□□□□□ -2.17
RFX7Q2KHR2 RNU6-1095P-201ENST00000516148 108 ntBASIC1.52□□□□□ -2.17
RFX7Q2KHR2 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
RFX7Q2KHR2 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.52□□□□□ -2.17
RFX7Q2KHR2 MIR4285-201ENST00000581001 85 ntBASIC1.52□□□□□ -2.17
RFX7Q2KHR2 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.52□□□□□ -2.17
RFX7Q2KHR2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.52□□□□□ -2.17
RFX7Q2KHR2 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.52□□□□□ -2.17
RFX7Q2KHR2 BNIP3P4-201ENST00000604946 565 ntBASIC1.52□□□□□ -2.17
RFX7Q2KHR2 AC093838.1-201ENST00000613014 469 ntBASIC1.52□□□□□ -2.17
RFX7Q2KHR2 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
RFX7Q2KHR2 MIR6767-201ENST00000637302 66 ntBASIC1.52□□□□□ -2.17
RFX7Q2KHR2 RNU6-921P-201ENST00000384361 107 ntBASIC1.51□□□□□ -2.17
RFX7Q2KHR2 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RFX7Q2KHR2 AC016769.3-201ENST00000396562 315 ntBASIC1.51□□□□□ -2.17
RFX7Q2KHR2 AC015922.2-201ENST00000435593 184 ntBASIC1.51□□□□□ -2.17
RFX7Q2KHR2 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.51□□□□□ -2.17
RFX7Q2KHR2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.51□□□□□ -2.17
RFX7Q2KHR2 RPL31P60-201ENST00000478450 367 ntBASIC1.51□□□□□ -2.17
RFX7Q2KHR2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.51□□□□□ -2.17
RFX7Q2KHR2 RNU6-760P-201ENST00000516078 97 ntBASIC1.51□□□□□ -2.17
RFX7Q2KHR2 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.51□□□□□ -2.17
RFX7Q2KHR2 AP005660.1-201ENST00000522972 293 ntBASIC1.51□□□□□ -2.17
RFX7Q2KHR2 EEF1B2P4-201ENST00000551398 348 ntBASIC1.51□□□□□ -2.17
RFX7Q2KHR2 AL133241.1-201ENST00000556832 487 ntBASIC1.51□□□□□ -2.17
RFX7Q2KHR2 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.51□□□□□ -2.17
RFX7Q2KHR2 AC010738.1-201ENST00000604970 987 ntBASIC1.51□□□□□ -2.17
RFX7Q2KHR2 AC022709.1-201ENST00000615967 87 ntBASIC1.51□□□□□ -2.17
RFX7Q2KHR2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.51□□□□□ -2.17
RFX7Q2KHR2 AP002791.1-201ENST00000623291 381 ntBASIC1.51□□□□□ -2.17
RFX7Q2KHR2 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.51□□□□□ -2.17
RFX7Q2KHR2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
RFX7Q2KHR2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
RFX7Q2KHR2 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.5□□□□□ -2.17
RFX7Q2KHR2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
RFX7Q2KHR2 AC068050.1-201ENST00000394891 380 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 HMGB1P49-201ENST00000418882 569 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.5□□□□□ -2.17
RFX7Q2KHR2 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 HMGB1P9-201ENST00000429856 646 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 AL121601.2-201ENST00000438019 707 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 HSPE1P24-201ENST00000450782 238 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 snoU109.4-201ENST00000458953 143 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 AL049714.1-201ENST00000466686 347 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 DYNLL1P5-201ENST00000467158 270 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 AC147055.4-201ENST00000504399 745 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 LTV1P1-201ENST00000510683 1237 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.5□□□□□ -2.17
RFX7Q2KHR2 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.5□□□□□ -2.17
RFX7Q2KHR2 AC004217.3-201ENST00000551552 878 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.5□□□□□ -2.17
RFX7Q2KHR2 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms