Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AC104435.1-201ENST00000483483 166 ntBASIC1.82□□□□□ -2.12
USF2Q15853 HMGB1P35-201ENST00000503360 598 ntBASIC1.82□□□□□ -2.12
USF2Q15853 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.82□□□□□ -2.12
USF2Q15853 AC008628.1-201ENST00000508663 265 ntBASIC1.82□□□□□ -2.12
USF2Q15853 AC026436.1-201ENST00000510537 270 ntBASIC1.82□□□□□ -2.12
USF2Q15853 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
USF2Q15853 AC114781.4-201ENST00000513707 639 ntBASIC1.82□□□□□ -2.12
USF2Q15853 AC110760.3-202ENST00000515177 371 ntBASIC1.82□□□□□ -2.12
USF2Q15853 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
USF2Q15853 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.82□□□□□ -2.12
USF2Q15853 AP002770.2-201ENST00000543613 532 ntBASIC1.82□□□□□ -2.12
USF2Q15853 AC027176.1-201ENST00000560204 514 ntBASIC1.82□□□□□ -2.12
USF2Q15853 BNIP3P23-201ENST00000599655 511 ntBASIC1.82□□□□□ -2.12
USF2Q15853 AC005776.1-201ENST00000603164 290 ntBASIC1.82□□□□□ -2.12
USF2Q15853 AC069545.1-201ENST00000605671 358 ntBASIC1.82□□□□□ -2.12
USF2Q15853 AC009974.1-201ENST00000608881 455 ntBASIC1.82□□□□□ -2.12
USF2Q15853 MIR6817-201ENST00000615588 66 ntBASIC1.82□□□□□ -2.12
USF2Q15853 AL079343.1-201ENST00000572358 1771 ntBASIC1.82□□□□□ -2.12
USF2Q15853 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.82□□□□□ -2.12
USF2Q15853 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
USF2Q15853 AC016717.2-201ENST00000609089 5141 ntBASIC1.81□□□□□ -2.12
USF2Q15853 MIR449A-201ENST00000362113 91 ntBASIC1.81□□□□□ -2.12
USF2Q15853 RNA5SP68-201ENST00000363885 119 ntBASIC1.81□□□□□ -2.12
USF2Q15853 RNU6-748P-201ENST00000384648 107 ntBASIC1.81□□□□□ -2.12
USF2Q15853 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.81□□□□□ -2.12
USF2Q15853 NDUFS5P1-201ENST00000405668 289 ntBASIC1.81□□□□□ -2.12
USF2Q15853 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.81□□□□□ -2.12
USF2Q15853 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.81□□□□□ -2.12
USF2Q15853 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.81□□□□□ -2.12
USF2Q15853 MTND5P14-201ENST00000441481 1267 ntBASIC1.81□□□□□ -2.12
USF2Q15853 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.81□□□□□ -2.12
USF2Q15853 MTND6P13-201ENST00000443510 523 ntBASIC1.81□□□□□ -2.12
USF2Q15853 MTCYBP42-201ENST00000444653 1130 ntBASIC1.81□□□□□ -2.12
USF2Q15853 AC020550.1-201ENST00000447385 163 ntBASIC1.81□□□□□ -2.12
USF2Q15853 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.81□□□□□ -2.12
USF2Q15853 MTND1P31-201ENST00000449206 961 ntBASIC1.81□□□□□ -2.12
USF2Q15853 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.81□□□□□ -2.12
USF2Q15853 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.81□□□□□ -2.12
USF2Q15853 AC092001.1-201ENST00000453012 261 ntBASIC1.81□□□□□ -2.12
USF2Q15853 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.81□□□□□ -2.12
USF2Q15853 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.81□□□□□ -2.12
USF2Q15853 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
USF2Q15853 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.81□□□□□ -2.12
USF2Q15853 RNA5SP148-201ENST00000516527 94 ntBASIC1.81□□□□□ -2.12
USF2Q15853 RNU1-40P-201ENST00000516816 164 ntBASIC1.81□□□□□ -2.12
USF2Q15853 RNU1-97P-201ENST00000516872 164 ntBASIC1.81□□□□□ -2.12
USF2Q15853 AP005639.2-201ENST00000527592 928 ntBASIC1.81□□□□□ -2.12
USF2Q15853 RANP3-201ENST00000530970 276 ntBASIC1.81□□□□□ -2.12
USF2Q15853 MRPS36P5-201ENST00000551909 298 ntBASIC1.81□□□□□ -2.12
USF2Q15853 SNRPGP1-201ENST00000553864 222 ntBASIC1.81□□□□□ -2.12
USF2Q15853 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.81□□□□□ -2.12
USF2Q15853 AC098826.3-201ENST00000603823 466 ntBASIC1.81□□□□□ -2.12
USF2Q15853 AL161798.1-201ENST00000604630 131 ntBASIC1.81□□□□□ -2.12
USF2Q15853 AC103810.6-201ENST00000606708 136 ntBASIC1.81□□□□□ -2.12
USF2Q15853 AF129408.1-201ENST00000608767 431 ntBASIC1.81□□□□□ -2.12
USF2Q15853 AC004908.2-201ENST00000609090 574 ntBASIC1.81□□□□□ -2.12
USF2Q15853 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.81□□□□□ -2.12
USF2Q15853 IGHVIII-44-202ENST00000636235 289 ntBASIC1.81□□□□□ -2.12
USF2Q15853 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.81□□□□□ -2.12
USF2Q15853 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USF2Q15853 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.8□□□□□ -2.12
USF2Q15853 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USF2Q15853 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USF2Q15853 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
USF2Q15853 Y_RNA.408-201ENST00000383987 102 ntBASIC1.8□□□□□ -2.12
USF2Q15853 AL030996.1-201ENST00000411430 235 ntBASIC1.8□□□□□ -2.12
USF2Q15853 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.8□□□□□ -2.12
USF2Q15853 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.8□□□□□ -2.12
USF2Q15853 AL161788.1-201ENST00000441805 169 ntBASIC1.8□□□□□ -2.12
USF2Q15853 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.8□□□□□ -2.12
USF2Q15853 OR6C5P-201ENST00000452388 923 ntBASIC1.8□□□□□ -2.12
USF2Q15853 AC126389.1-201ENST00000477436 290 ntBASIC1.8□□□□□ -2.12
USF2Q15853 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.8□□□□□ -2.12
USF2Q15853 RPL23AP49-201ENST00000492925 468 ntBASIC1.8□□□□□ -2.12
USF2Q15853 AC234781.5-201ENST00000508429 271 ntBASIC1.8□□□□□ -2.12
USF2Q15853 RNU6-150P-201ENST00000516237 95 ntBASIC1.8□□□□□ -2.12
USF2Q15853 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.8□□□□□ -2.12
USF2Q15853 AC021269.2-201ENST00000532318 330 ntBASIC1.8□□□□□ -2.12
USF2Q15853 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USF2Q15853 AC009097.3-201ENST00000563557 1018 ntBASIC1.8□□□□□ -2.12
USF2Q15853 AC012213.3-201ENST00000577199 777 ntBASIC1.8□□□□□ -2.12
USF2Q15853 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
USF2Q15853 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.8□□□□□ -2.12
USF2Q15853 AL121917.1-203ENST00000605534 577 ntBASIC1.8□□□□□ -2.12
USF2Q15853 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
USF2Q15853 AL773524.1-201ENST00000614065 229 ntBASIC1.8□□□□□ -2.12
USF2Q15853 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.8□□□□□ -2.12
USF2Q15853 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.8□□□□□ -2.12
USF2Q15853 AC091953.2-201ENST00000623979 160 ntBASIC1.8□□□□□ -2.12
USF2Q15853 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
USF2Q15853 RNU1-72P-201ENST00000362976 153 ntBASIC1.79□□□□□ -2.12
USF2Q15853 RNU5B-4P-201ENST00000363508 111 ntBASIC1.79□□□□□ -2.12
USF2Q15853 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.79□□□□□ -2.12
USF2Q15853 MIR1302-8-201ENST00000408342 128 ntBASIC1.79□□□□□ -2.12
USF2Q15853 RNA5SP489-201ENST00000410986 109 ntBASIC1.79□□□□□ -2.12
USF2Q15853 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.79□□□□□ -2.12
USF2Q15853 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.79□□□□□ -2.12
USF2Q15853 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.79□□□□□ -2.12
USF2Q15853 NANOGP5-201ENST00000424456 877 ntBASIC1.79□□□□□ -2.12
USF2Q15853 RPS15AP28-201ENST00000435088 386 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms