Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 MIR422A-201ENST00000362286 90 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 RNU6-511P-201ENST00000363496 107 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 Y_RNA.460-201ENST00000384255 102 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 RNU6-339P-201ENST00000384310 107 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 MIR558-201ENST00000384920 94 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 FAT1P1-201ENST00000406588 507 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.05□□□□□ -1.76
SF3B3Q15393 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SF3B3Q15393 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.05□□□□□ -1.76
SF3B3Q15393 AC005517.2-201ENST00000424673 553 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 RPL35AP12-201ENST00000425362 338 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 AL365400.1-201ENST00000431854 640 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 RN7SL863P-201ENST00000462370 296 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 AC006512.1-201ENST00000468816 291 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SF3B3Q15393 RPS4XP13-201ENST00000483219 789 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SF3B3Q15393 RPL23AP55-201ENST00000498163 452 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 AC017037.2-201ENST00000513850 890 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 AC114797.1-201ENST00000514003 728 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 AC105417.1-201ENST00000514691 285 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.05□□□□□ -1.76
SF3B3Q15393 IGKV2D-36-201ENST00000518643 226 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 AC022690.1-201ENST00000526681 550 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.05□□□□□ -1.76
SF3B3Q15393 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SF3B3Q15393 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.05□□□□□ -1.76
SF3B3Q15393 AL121603.1-201ENST00000553815 142 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.05□□□□□ -1.76
SF3B3Q15393 MIR3690-201ENST00000580266 75 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.05□□□□□ -1.76
SF3B3Q15393 AC005034.5-201ENST00000604219 466 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 AL050343.2-201ENST00000607338 280 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 AC004908.2-201ENST00000609090 574 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 XIST_intron.1-201ENST00000619444 68 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 AC009248.2-201ENST00000619826 254 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 AC090574.1-201ENST00000623186 233 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 AC244205.2-202ENST00000635781 342 ntBASIC4.05□□□□□ -1.76
SF3B3Q15393 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.05□□□□□ -1.76
SF3B3Q15393 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SF3B3Q15393 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.05□□□□□ -1.76
SF3B3Q15393 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.05□□□□□ -1.76
SF3B3Q15393 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SF3B3Q15393 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SF3B3Q15393 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.04□□□□□ -1.76
SF3B3Q15393 HSPE1P11-201ENST00000339579 310 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 MIR454-201ENST00000390180 115 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 AP000567.1-201ENST00000406413 156 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 SNORA11.2-201ENST00000408318 127 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 AC126124.2-201ENST00000413542 321 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.04□□□□□ -1.76
SF3B3Q15393 MTCYBP8-201ENST00000422855 651 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 MED13P1-201ENST00000428342 171 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 MRPL50P4-201ENST00000446432 475 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 RNU7-59P-201ENST00000459101 61 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 HMGN2P26-201ENST00000463169 339 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 HMGN1P13-201ENST00000505795 138 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SF3B3Q15393 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.04□□□□□ -1.76
SF3B3Q15393 AC112206.3-201ENST00000514578 389 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.04□□□□□ -1.76
SF3B3Q15393 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 SCARNA15.1-201ENST00000516384 125 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 RNU7-30P-201ENST00000516835 62 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 AC107953.1-201ENST00000522216 297 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.04□□□□□ -1.76
SF3B3Q15393 AP000857.1-201ENST00000532151 543 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.04□□□□□ -1.76
SF3B3Q15393 HPRT1P3-201ENST00000539521 576 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 SETP7-201ENST00000552169 453 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.04□□□□□ -1.76
SF3B3Q15393 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.04□□□□□ -1.76
SF3B3Q15393 AP001029.3-201ENST00000588063 596 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.04□□□□□ -1.76
SF3B3Q15393 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.04□□□□□ -1.76
SF3B3Q15393 AL034351.1-201ENST00000605288 668 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 AL157817.1-201ENST00000614264 790 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 SNORD39.4-201ENST00000620099 78 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 SCARNA15.3-201ENST00000626315 122 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 SCARNA4.1-201ENST00000628597 123 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.04□□□□□ -1.76
SF3B3Q15393 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.04□□□□□ -1.76
SF3B3Q15393 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.04□□□□□ -1.76
SF3B3Q15393 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SF3B3Q15393 ASNSP3-201ENST00000451989 1306 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.03□□□□□ -1.76
SF3B3Q15393 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.03□□□□□ -1.76
SF3B3Q15393 SNORA7.4-201ENST00000384249 137 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 RNA5SP229-201ENST00000410809 99 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 RHEBP3-201ENST00000411920 351 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 AL158071.1-201ENST00000430315 461 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 RPL23AP69-201ENST00000431134 458 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.03□□□□□ -1.76
SF3B3Q15393 MTATP6P16-201ENST00000434543 526 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.03□□□□□ -1.76
SF3B3Q15393 RPL23AP67-201ENST00000465341 474 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 AC126389.1-201ENST00000477436 290 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms