Protein–RNA interactions for Protein: Q14994

NR1I3, Nuclear receptor subfamily 1 group I member 3, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3Q14994 AL451142.2-201ENST00000429076 2090 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 SNORA60-201ENST00000362396 134 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 Y_RNA.39-201ENST00000362620 98 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 RNU1-18P-201ENST00000363062 164 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 RN7SKP103-201ENST00000363848 320 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 RNU6-266P-201ENST00000364225 107 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 Y_RNA.314-201ENST00000365114 102 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 RNU6-398P-201ENST00000384143 109 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 RNU6-146P-201ENST00000384602 108 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 MIR517A-201ENST00000385001 87 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NR1I3Q14994 AC110754.1-201ENST00000399740 601 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.35□□□□□ -1.71
NR1I3Q14994 RNA5SP56-201ENST00000410277 118 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.35□□□□□ -1.71
NR1I3Q14994 AL160275.3-201ENST00000423876 471 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 AC008065.1-201ENST00000428525 348 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 AL591212.2-201ENST00000433923 257 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 AC004866.2-201ENST00000438285 481 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 MTND2P29-201ENST00000438595 412 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 RPL23AP33-201ENST00000442301 452 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 RPL9P32-201ENST00000464118 620 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.35□□□□□ -1.71
NR1I3Q14994 RNU6-677P-201ENST00000516914 101 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 AC104576.1-201ENST00000524225 88 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.35□□□□□ -1.71
NR1I3Q14994 HMGB3P26-201ENST00000560051 582 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.35□□□□□ -1.71
NR1I3Q14994 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.35□□□□□ -1.71
NR1I3Q14994 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.35□□□□□ -1.71
NR1I3Q14994 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.35□□□□□ -1.71
NR1I3Q14994 ELOCP5-201ENST00000604924 333 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.35□□□□□ -1.71
NR1I3Q14994 AC138627.2-201ENST00000624202 601 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NR1I3Q14994 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NR1I3Q14994 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NR1I3Q14994 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NR1I3Q14994 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NR1I3Q14994 AC139713.2-214ENST00000642059 1811 ntBASIC4.35□□□□□ -1.71
NR1I3Q14994 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.35□□□□□ -1.71
NR1I3Q14994 PHKBP1-201ENST00000450951 1951 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.34□□□□□ -1.71
NR1I3Q14994 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NR1I3Q14994 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NR1I3Q14994 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.34□□□□□ -1.71
NR1I3Q14994 Y_RNA.106-201ENST00000363189 100 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 SNORA58B-201ENST00000364259 136 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 Y_RNA.447-201ENST00000384184 113 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 Y_RNA.489-201ENST00000384410 101 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 RNU6-293P-201ENST00000411259 106 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NR1I3Q14994 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 RPL12P34-201ENST00000424532 479 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 RPS15AP10-201ENST00000432472 382 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 AL591704.1-201ENST00000432574 275 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 SUMO1P3-201ENST00000439961 304 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.34□□□□□ -1.71
NR1I3Q14994 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.34□□□□□ -1.71
NR1I3Q14994 RPS11P1-201ENST00000451072 473 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.34□□□□□ -1.71
NR1I3Q14994 RPS24P6-201ENST00000452670 400 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.34□□□□□ -1.71
NR1I3Q14994 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.34□□□□□ -1.71
NR1I3Q14994 AP000926.1-201ENST00000479573 241 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 AC104136.1-201ENST00000512969 394 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
NR1I3Q14994 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.34□□□□□ -1.71
NR1I3Q14994 AC109446.1-201ENST00000566172 220 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NR1I3Q14994 AL591424.2-201ENST00000617023 128 ntBASIC4.34□□□□□ -1.71
NR1I3Q14994 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.34□□□□□ -1.71
NR1I3Q14994 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NR1I3Q14994 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.33□□□□□ -1.72
NR1I3Q14994 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1I3Q14994 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1I3Q14994 PABPC1P7-201ENST00000413177 1513 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 Y_RNA.126-201ENST00000363382 111 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 RNA5SP399-201ENST00000364003 117 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NR1I3Q14994 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NR1I3Q14994 SNORA41-201ENST00000384675 132 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 AL133270.1-201ENST00000402635 279 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 AL603908.1-201ENST00000406098 201 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 HSPE1P12-201ENST00000412576 301 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 HMGB1P9-201ENST00000429856 646 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 RPS20P1-201ENST00000434853 354 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 CHEK2P4-201ENST00000450340 246 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 AC112492.4-201ENST00000456549 352 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 AC011276.1-201ENST00000469688 323 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 AC018437.1-201ENST00000492214 406 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 RN7SL604P-201ENST00000492589 296 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 RNY3P15-201ENST00000516297 97 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 RNU6-307P-201ENST00000516743 106 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 RNU6-352P-201ENST00000516908 107 ntBASIC4.33□□□□□ -1.72
NR1I3Q14994 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.33□□□□□ -1.72
NR1I3Q14994 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.33□□□□□ -1.72
NR1I3Q14994 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.33□□□□□ -1.72
NR1I3Q14994 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms