Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC008443.7-201ENST00000622195 246 ntBASIC0.91□□□□□ -2.26
SSBP1Q04837 AC007490.1-201ENST00000624321 703 ntBASIC0.91□□□□□ -2.26
SSBP1Q04837 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.91□□□□□ -2.26
SSBP1Q04837 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.91□□□□□ -2.26
SSBP1Q04837 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
SSBP1Q04837 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
SSBP1Q04837 SEC63P2-201ENST00000503863 1939 ntBASIC0.91□□□□□ -2.26
SSBP1Q04837 PAPPA-AS1-201ENST00000445861 2450 ntBASIC0.9□□□□□ -2.27
SSBP1Q04837 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.27
SSBP1Q04837 RNU6-76P-201ENST00000384060 104 ntBASIC0.9□□□□□ -2.27
SSBP1Q04837 SNORA51.6-201ENST00000384151 125 ntBASIC0.9□□□□□ -2.27
SSBP1Q04837 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
SSBP1Q04837 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SSBP1Q04837 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
SSBP1Q04837 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.9□□□□□ -2.27
SSBP1Q04837 BOLA3P4-201ENST00000418151 400 ntBASIC0.9□□□□□ -2.27
SSBP1Q04837 RPL30P13-201ENST00000418873 348 ntBASIC0.9□□□□□ -2.27
SSBP1Q04837 AC018630.2-202ENST00000422992 927 ntBASIC0.9□□□□□ -2.27
SSBP1Q04837 AL022238.1-201ENST00000442557 355 ntBASIC0.9□□□□□ -2.27
SSBP1Q04837 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.9□□□□□ -2.27
SSBP1Q04837 RPL30P12-201ENST00000474666 353 ntBASIC0.9□□□□□ -2.27
SSBP1Q04837 RPL36AP21-201ENST00000490372 323 ntBASIC0.9□□□□□ -2.27
SSBP1Q04837 AC008837.1-201ENST00000511513 412 ntBASIC0.9□□□□□ -2.27
SSBP1Q04837 DUXAP5-201ENST00000529668 529 ntBASIC0.9□□□□□ -2.27
SSBP1Q04837 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.9□□□□□ -2.27
SSBP1Q04837 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.9□□□□□ -2.27
SSBP1Q04837 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.9□□□□□ -2.27
SSBP1Q04837 uc_338.12-201ENST00000616344 181 ntBASIC0.9□□□□□ -2.27
SSBP1Q04837 SCARNA15.3-201ENST00000626315 122 ntBASIC0.9□□□□□ -2.27
SSBP1Q04837 SCARNA4.1-201ENST00000628597 123 ntBASIC0.9□□□□□ -2.27
SSBP1Q04837 AC092192.1-201ENST00000633154 1018 ntBASIC0.9□□□□□ -2.27
SSBP1Q04837 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
SSBP1Q04837 ZNF29P-201ENST00000225587 168 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 MIR26B-201ENST00000362251 77 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 RNU6-140P-201ENST00000384566 108 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 RNA5SP212-201ENST00000391223 107 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 RPL23AP29-201ENST00000397284 453 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SSBP1Q04837 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.89□□□□□ -2.27
SSBP1Q04837 ZNF863P-201ENST00000426746 417 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.89□□□□□ -2.27
SSBP1Q04837 AC009238.1-201ENST00000442165 424 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.89□□□□□ -2.27
SSBP1Q04837 AC009237.6-201ENST00000446969 424 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 AC117503.1-201ENST00000472241 394 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SSBP1Q04837 MRPS33P3-201ENST00000513456 322 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 AC022483.1-201ENST00000514020 567 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 RNA5SP445-201ENST00000515889 115 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 AP005660.1-201ENST00000522972 293 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 AP003066.2-201ENST00000529375 555 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 AC084364.2-201ENST00000546924 395 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.89□□□□□ -2.27
SSBP1Q04837 MIR4765-201ENST00000585007 77 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 VN1R88P-201ENST00000596787 292 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 GAS5-AS1-201ENST00000602767 694 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 AL138478.1-201ENST00000612252 832 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 AC005832.2-201ENST00000538921 1430 ntBASIC0.89□□□□□ -2.27
SSBP1Q04837 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.88□□□□□ -2.27
SSBP1Q04837 RNU6-819P-201ENST00000364116 107 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 MIR7-1-201ENST00000384871 110 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 RPL23AP36-201ENST00000413895 458 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 CYCSP49-201ENST00000420810 319 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 BPY2DP-201ENST00000422208 265 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 AL590233.1-201ENST00000430017 456 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 HMGB1P27-201ENST00000431429 603 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC0.88□□□□□ -2.27
SSBP1Q04837 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.88□□□□□ -2.27
SSBP1Q04837 MTND2P21-201ENST00000436242 1042 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 FABP5P14-201ENST00000437273 393 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.88□□□□□ -2.27
SSBP1Q04837 MTND2P24-201ENST00000453434 806 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 AC244505.3-201ENST00000454598 187 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 RPS20P22-201ENST00000473700 357 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.88□□□□□ -2.27
SSBP1Q04837 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.88□□□□□ -2.27
SSBP1Q04837 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.88□□□□□ -2.27
SSBP1Q04837 HSPA8P13-201ENST00000523715 472 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
SSBP1Q04837 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
SSBP1Q04837 AC007151.1-201ENST00000572774 483 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 MIR4421-201ENST00000578133 69 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.88□□□□□ -2.27
SSBP1Q04837 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC0.88□□□□□ -2.27
SSBP1Q04837 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.88□□□□□ -2.27
SSBP1Q04837 FTX_3.1-201ENST00000610451 147 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 TUG1_1.1-201ENST00000610654 145 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 DUXAP10-204ENST00000612052 616 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 VN1R9P-201ENST00000614184 867 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 FRG1HP-204ENST00000617940 757 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 MTND5P30-201ENST00000452896 1731 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 MTCO1P23-201ENST00000415223 1526 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.88□□□□□ -2.27
SSBP1Q04837 GDI2P1-201ENST00000429312 1336 ntBASIC0.88□□□□□ -2.27
SSBP1Q04837 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SSBP1Q04837 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
SSBP1Q04837 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
SSBP1Q04837 RNU6-741P-201ENST00000383889 107 ntBASIC0.87□□□□□ -2.27
SSBP1Q04837 MIR888-201ENST00000401186 77 ntBASIC0.87□□□□□ -2.27
SSBP1Q04837 AL109755.1-201ENST00000401791 649 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms