Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC026782.1-201ENST00000512952 449 ntBASIC4.05□□□□□ -1.76
IRF9Q00978 RNU1-86P-201ENST00000516108 154 ntBASIC4.05□□□□□ -1.76
IRF9Q00978 MIR892C-201ENST00000516410 77 ntBASIC4.05□□□□□ -1.76
IRF9Q00978 RNU1-107P-201ENST00000516617 154 ntBASIC4.05□□□□□ -1.76
IRF9Q00978 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.05□□□□□ -1.76
IRF9Q00978 AC009643.1-201ENST00000532030 391 ntBASIC4.05□□□□□ -1.76
IRF9Q00978 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
IRF9Q00978 SNRPGP18-201ENST00000553000 214 ntBASIC4.05□□□□□ -1.76
IRF9Q00978 TRAV37-201ENST00000553906 342 ntBASIC4.05□□□□□ -1.76
IRF9Q00978 MIR4284-201ENST00000578924 81 ntBASIC4.05□□□□□ -1.76
IRF9Q00978 ELOCP5-201ENST00000604924 333 ntBASIC4.05□□□□□ -1.76
IRF9Q00978 AC106900.2-201ENST00000604994 317 ntBASIC4.05□□□□□ -1.76
IRF9Q00978 AC018462.2-201ENST00000605375 395 ntBASIC4.05□□□□□ -1.76
IRF9Q00978 AL162730.1-201ENST00000605734 292 ntBASIC4.05□□□□□ -1.76
IRF9Q00978 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
IRF9Q00978 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.05□□□□□ -1.76
IRF9Q00978 uc_338.22-201ENST00000622722 187 ntBASIC4.05□□□□□ -1.76
IRF9Q00978 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.05□□□□□ -1.76
IRF9Q00978 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
IRF9Q00978 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
IRF9Q00978 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
IRF9Q00978 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
IRF9Q00978 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
IRF9Q00978 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
IRF9Q00978 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
IRF9Q00978 AC007390.2-201ENST00000606229 3803 ntBASIC4.04□□□□□ -1.76
IRF9Q00978 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.04□□□□□ -1.76
IRF9Q00978 SNORD35B-201ENST00000363660 87 ntBASIC4.04□□□□□ -1.76
IRF9Q00978 Y_RNA.324-201ENST00000365165 102 ntBASIC4.04□□□□□ -1.76
IRF9Q00978 RNA5SP167-201ENST00000365461 116 ntBASIC4.04□□□□□ -1.76
IRF9Q00978 Y_RNA.422-201ENST00000384054 114 ntBASIC4.04□□□□□ -1.76
IRF9Q00978 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.04□□□□□ -1.76
IRF9Q00978 UBE2D3P2-201ENST00000424409 445 ntBASIC4.04□□□□□ -1.76
IRF9Q00978 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.04□□□□□ -1.76
IRF9Q00978 COX6B1P7-201ENST00000430845 235 ntBASIC4.04□□□□□ -1.76
IRF9Q00978 AL645568.3-201ENST00000433683 316 ntBASIC4.04□□□□□ -1.76
IRF9Q00978 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.04□□□□□ -1.76
IRF9Q00978 FGF7P3-201ENST00000454645 303 ntBASIC4.04□□□□□ -1.76
IRF9Q00978 S100A11P1-201ENST00000477525 312 ntBASIC4.04□□□□□ -1.76
IRF9Q00978 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.04□□□□□ -1.76
IRF9Q00978 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.04□□□□□ -1.76
IRF9Q00978 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.04□□□□□ -1.76
IRF9Q00978 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.04□□□□□ -1.76
IRF9Q00978 AC022634.1-201ENST00000520765 532 ntBASIC4.04□□□□□ -1.76
IRF9Q00978 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.04□□□□□ -1.76
IRF9Q00978 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.04□□□□□ -1.76
IRF9Q00978 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.04□□□□□ -1.76
IRF9Q00978 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.04□□□□□ -1.76
IRF9Q00978 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.04□□□□□ -1.76
IRF9Q00978 AC009229.3-201ENST00000608056 282 ntBASIC4.04□□□□□ -1.76
IRF9Q00978 AL161423.1-201ENST00000613700 262 ntBASIC4.04□□□□□ -1.76
IRF9Q00978 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.04□□□□□ -1.76
IRF9Q00978 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
IRF9Q00978 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
IRF9Q00978 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
IRF9Q00978 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
IRF9Q00978 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
IRF9Q00978 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.03□□□□□ -1.76
IRF9Q00978 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
IRF9Q00978 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.03□□□□□ -1.76
IRF9Q00978 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
IRF9Q00978 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.03□□□□□ -1.76
IRF9Q00978 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
IRF9Q00978 AC126755.2-208ENST00000327792 462 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 AC138969.1-213ENST00000331436 462 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 SNORA31-201ENST00000362607 130 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 SNORA33.2-201ENST00000365413 134 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 RNU6-1329P-201ENST00000365664 107 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 RNU6-738P-201ENST00000384531 106 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 RNU6-306P-201ENST00000384617 107 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 U3.22-201ENST00000391120 215 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 Y_RNA.594-201ENST00000410373 140 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 RNU6-1050P-201ENST00000410388 107 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.03□□□□□ -1.76
IRF9Q00978 RPS15AP6-201ENST00000420703 385 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 RPL18P10-201ENST00000425606 538 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 MYL8P-204ENST00000431574 518 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 VDAC1P3-201ENST00000434069 851 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.03□□□□□ -1.76
IRF9Q00978 AL137792.2-201ENST00000443484 235 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.03□□□□□ -1.76
IRF9Q00978 AC009237.8-201ENST00000445492 379 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 TPT1P12-201ENST00000448968 492 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 RNA5SP246-201ENST00000458909 119 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 AC011276.1-201ENST00000469688 323 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 AC011005.2-201ENST00000487324 359 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 AC097473.1-201ENST00000508142 408 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.03□□□□□ -1.76
IRF9Q00978 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.03□□□□□ -1.76
IRF9Q00978 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.03□□□□□ -1.76
IRF9Q00978 Y_RNA.670-201ENST00000516255 105 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 AC104576.1-201ENST00000524225 88 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 GNRHR2P1-201ENST00000555315 631 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 TRAV28-201ENST00000557548 323 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 MIR4277-201ENST00000578298 84 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 MIR4697-201ENST00000582977 78 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 OR1M4P-201ENST00000589199 287 ntBASIC4.03□□□□□ -1.76
IRF9Q00978 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.03□□□□□ -1.76
IRF9Q00978 AC016925.2-201ENST00000605108 242 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms