Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC091544.4-201ENST00000555268 342 ntBASIC2.96□□□□□ -1.94
IRX4P78413 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.96□□□□□ -1.94
IRX4P78413 AL133153.1-201ENST00000557756 303 ntBASIC2.96□□□□□ -1.94
IRX4P78413 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.96□□□□□ -1.94
IRX4P78413 AC137800.2-201ENST00000574375 120 ntBASIC2.96□□□□□ -1.94
IRX4P78413 AC015871.2-201ENST00000603605 948 ntBASIC2.96□□□□□ -1.94
IRX4P78413 AL139286.2-201ENST00000606838 396 ntBASIC2.96□□□□□ -1.94
IRX4P78413 AC098614.4-201ENST00000607601 462 ntBASIC2.96□□□□□ -1.94
IRX4P78413 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.96□□□□□ -1.94
IRX4P78413 AL359198.2-201ENST00000611836 194 ntBASIC2.96□□□□□ -1.94
IRX4P78413 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.96□□□□□ -1.94
IRX4P78413 OR5H6-203ENST00000642105 978 ntBASIC2.96□□□□□ -1.94
IRX4P78413 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.96□□□□□ -1.94
IRX4P78413 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
IRX4P78413 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
IRX4P78413 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
IRX4P78413 RNU6-623P-201ENST00000363143 105 ntBASIC2.95□□□□□ -1.94
IRX4P78413 RNY4P16-201ENST00000364768 94 ntBASIC2.95□□□□□ -1.94
IRX4P78413 RNY4P34-201ENST00000364779 95 ntBASIC2.95□□□□□ -1.94
IRX4P78413 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
IRX4P78413 MIR181A2-201ENST00000384863 110 ntBASIC2.95□□□□□ -1.94
IRX4P78413 RPS3AP36-201ENST00000398190 775 ntBASIC2.95□□□□□ -1.94
IRX4P78413 RNU6-248P-201ENST00000410720 107 ntBASIC2.95□□□□□ -1.94
IRX4P78413 UBE2FP1-201ENST00000416536 447 ntBASIC2.95□□□□□ -1.94
IRX4P78413 AL645937.1-202ENST00000421799 937 ntBASIC2.95□□□□□ -1.94
IRX4P78413 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.95□□□□□ -1.94
IRX4P78413 SAR1AP4-201ENST00000429225 591 ntBASIC2.95□□□□□ -1.94
IRX4P78413 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.95□□□□□ -1.94
IRX4P78413 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.95□□□□□ -1.94
IRX4P78413 AL031667.1-201ENST00000440222 725 ntBASIC2.95□□□□□ -1.94
IRX4P78413 PGBD4P3-201ENST00000440731 581 ntBASIC2.95□□□□□ -1.94
IRX4P78413 AC244505.5-201ENST00000443639 207 ntBASIC2.95□□□□□ -1.94
IRX4P78413 EEF1B2P7-201ENST00000451177 676 ntBASIC2.95□□□□□ -1.94
IRX4P78413 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.95□□□□□ -1.94
IRX4P78413 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.95□□□□□ -1.94
IRX4P78413 TPTE2P5-203ENST00000458118 728 ntBASIC2.95□□□□□ -1.94
IRX4P78413 TPT1P7-201ENST00000458300 517 ntBASIC2.95□□□□□ -1.94
IRX4P78413 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.95□□□□□ -1.94
IRX4P78413 RPS20P20-201ENST00000460498 340 ntBASIC2.95□□□□□ -1.94
IRX4P78413 KLF3P2-201ENST00000465138 268 ntBASIC2.95□□□□□ -1.94
IRX4P78413 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.95□□□□□ -1.94
IRX4P78413 MTND1P3-201ENST00000484956 952 ntBASIC2.95□□□□□ -1.94
IRX4P78413 LARP1BP2-201ENST00000486594 519 ntBASIC2.95□□□□□ -1.94
IRX4P78413 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.95□□□□□ -1.94
IRX4P78413 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.95□□□□□ -1.94
IRX4P78413 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.95□□□□□ -1.94
IRX4P78413 SNORA18.6-201ENST00000516792 115 ntBASIC2.95□□□□□ -1.94
IRX4P78413 SNORA31.26-201ENST00000517250 137 ntBASIC2.95□□□□□ -1.94
IRX4P78413 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
IRX4P78413 HMGN1P28-201ENST00000521340 364 ntBASIC2.95□□□□□ -1.94
IRX4P78413 AP002963.1-201ENST00000530590 184 ntBASIC2.95□□□□□ -1.94
IRX4P78413 AP000857.1-201ENST00000532151 543 ntBASIC2.95□□□□□ -1.94
IRX4P78413 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.95□□□□□ -1.94
IRX4P78413 AC124947.2-202ENST00000552735 133 ntBASIC2.95□□□□□ -1.94
IRX4P78413 BX664608.1-201ENST00000610519 487 ntBASIC2.95□□□□□ -1.94
IRX4P78413 AC090970.3-201ENST00000612566 866 ntBASIC2.95□□□□□ -1.94
IRX4P78413 HULC.1-201ENST00000612720 240 ntBASIC2.95□□□□□ -1.94
IRX4P78413 TUG1_2.1-201ENST00000614234 87 ntBASIC2.95□□□□□ -1.94
IRX4P78413 AP001506.1-201ENST00000615444 211 ntBASIC2.95□□□□□ -1.94
IRX4P78413 AP003122.6-201ENST00000623831 495 ntBASIC2.95□□□□□ -1.94
IRX4P78413 AC091953.2-201ENST00000623979 160 ntBASIC2.95□□□□□ -1.94
IRX4P78413 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.95□□□□□ -1.94
IRX4P78413 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
IRX4P78413 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
IRX4P78413 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
IRX4P78413 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.94□□□□□ -1.94
IRX4P78413 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
IRX4P78413 RNU6-799P-201ENST00000363567 107 ntBASIC2.94□□□□□ -1.94
IRX4P78413 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
IRX4P78413 RN7SKP140-201ENST00000411196 284 ntBASIC2.94□□□□□ -1.94
IRX4P78413 AL663109.1-201ENST00000411498 844 ntBASIC2.94□□□□□ -1.94
IRX4P78413 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.94□□□□□ -1.94
IRX4P78413 AC019097.1-201ENST00000424783 735 ntBASIC2.94□□□□□ -1.94
IRX4P78413 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.94□□□□□ -1.94
IRX4P78413 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
IRX4P78413 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.94□□□□□ -1.94
IRX4P78413 AC087499.2-201ENST00000432861 149 ntBASIC2.94□□□□□ -1.94
IRX4P78413 TIMM9P1-201ENST00000436122 256 ntBASIC2.94□□□□□ -1.94
IRX4P78413 RPL35AP22-201ENST00000436855 335 ntBASIC2.94□□□□□ -1.94
IRX4P78413 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
IRX4P78413 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.94□□□□□ -1.94
IRX4P78413 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.94□□□□□ -1.94
IRX4P78413 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.94□□□□□ -1.94
IRX4P78413 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.94□□□□□ -1.94
IRX4P78413 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.94□□□□□ -1.94
IRX4P78413 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.94□□□□□ -1.94
IRX4P78413 AL590639.1-201ENST00000456484 337 ntBASIC2.94□□□□□ -1.94
IRX4P78413 RNU6-420P-201ENST00000458780 107 ntBASIC2.94□□□□□ -1.94
IRX4P78413 RNU7-59P-201ENST00000459101 61 ntBASIC2.94□□□□□ -1.94
IRX4P78413 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
IRX4P78413 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
IRX4P78413 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.94□□□□□ -1.94
IRX4P78413 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.94□□□□□ -1.94
IRX4P78413 AC107934.1-201ENST00000522215 217 ntBASIC2.94□□□□□ -1.94
IRX4P78413 AL355836.1-201ENST00000555951 870 ntBASIC2.94□□□□□ -1.94
IRX4P78413 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.94□□□□□ -1.94
IRX4P78413 AGGF1P4-201ENST00000568249 801 ntBASIC2.94□□□□□ -1.94
IRX4P78413 AC012213.3-201ENST00000577199 777 ntBASIC2.94□□□□□ -1.94
IRX4P78413 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.94□□□□□ -1.94
IRX4P78413 MIR3146-201ENST00000580367 79 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms