Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SEC61A1P61619 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.18□□□□□ -1.9
SEC61A1P61619 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SEC61A1P61619 ZNF826P-207ENST00000622273 1910 ntBASIC3.18□□□□□ -1.9
SEC61A1P61619 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SEC61A1P61619 ZNF285B-201ENST00000561698 1767 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SEC61A1P61619 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SEC61A1P61619 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SEC61A1P61619 RNU1-75P-201ENST00000347264 129 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 SNORA31-201ENST00000362607 130 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 Y_RNA.67-201ENST00000362870 100 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 Y_RNA.166-201ENST00000363730 102 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 RNA5SP189-201ENST00000364920 115 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 Y_RNA.378-201ENST00000365652 113 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 AP002088.1-201ENST00000382740 395 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 Y_RNA.419-201ENST00000384041 102 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 MTND3P8-201ENST00000412909 339 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 OR6C66P-201ENST00000414917 930 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.17□□□□□ -1.9
SEC61A1P61619 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SEC61A1P61619 VDAC1P3-201ENST00000434069 851 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 PPP1R2P5-201ENST00000457256 603 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.17□□□□□ -1.9
SEC61A1P61619 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SEC61A1P61619 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.17□□□□□ -1.9
SEC61A1P61619 RN7SL442P-201ENST00000473804 320 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.17□□□□□ -1.9
SEC61A1P61619 RN7SL432P-201ENST00000484057 298 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 AL049874.1-201ENST00000489560 388 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 MTCO3P9-201ENST00000506989 781 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 HMGB3P15-201ENST00000507326 574 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 SLC25A15P5-201ENST00000508033 253 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 PHBP14-201ENST00000512887 367 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.17□□□□□ -1.9
SEC61A1P61619 RNA5SP208-201ENST00000516156 78 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 ERHP1-201ENST00000523006 310 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 AP004242.1-201ENST00000533701 349 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 AC011611.1-201ENST00000552179 197 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.17□□□□□ -1.9
SEC61A1P61619 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.17□□□□□ -1.9
SEC61A1P61619 PSMA3P-201ENST00000555485 635 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.17□□□□□ -1.9
SEC61A1P61619 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.17□□□□□ -1.9
SEC61A1P61619 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.17□□□□□ -1.9
SEC61A1P61619 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.17□□□□□ -1.9
SEC61A1P61619 AC005668.1-201ENST00000571142 476 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 RPL23AP84-201ENST00000571193 464 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 MIR4424-201ENST00000585257 86 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.17□□□□□ -1.9
SEC61A1P61619 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.17□□□□□ -1.9
SEC61A1P61619 AC016727.1-205ENST00000605437 569 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 AL390240.1-201ENST00000612950 384 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 AL355810.1-201ENST00000614629 552 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 uc_338.34-201ENST00000617467 174 ntBASIC3.17□□□□□ -1.9
SEC61A1P61619 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.17□□□□□ -1.9
SEC61A1P61619 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.17□□□□□ -1.9
SEC61A1P61619 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SEC61A1P61619 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SEC61A1P61619 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SEC61A1P61619 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SEC61A1P61619 AL513302.2-201ENST00000562313 1842 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
SEC61A1P61619 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEC61A1P61619 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SEC61A1P61619 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.16□□□□□ -1.9
SEC61A1P61619 MTND4P14-201ENST00000435799 1354 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEC61A1P61619 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SEC61A1P61619 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEC61A1P61619 AL139276.1-201ENST00000311910 1001 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SEC61A1P61619 RNU4-79P-201ENST00000362764 141 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 RNU6-173P-201ENST00000364215 104 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 RNU6-522P-201ENST00000364497 107 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 RNU4-76P-201ENST00000364509 141 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 SNORA73.2-201ENST00000364946 201 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 RNU6-805P-201ENST00000365643 106 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SEC61A1P61619 RNU6-116P-201ENST00000384042 109 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SEC61A1P61619 RNU6-510P-201ENST00000391239 108 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SEC61A1P61619 AC110754.1-201ENST00000399740 601 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 TXNP7-201ENST00000406296 293 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.16□□□□□ -1.9
SEC61A1P61619 RN7SKP32-201ENST00000410167 303 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 RPL7P46-201ENST00000425129 740 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.16□□□□□ -1.9
SEC61A1P61619 BX679664.1-201ENST00000434429 253 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 PRPS1P1-201ENST00000445305 876 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 AC020550.1-201ENST00000447385 163 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 SNRPGP5-201ENST00000456003 220 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.16□□□□□ -1.9
SEC61A1P61619 MTND4P17-201ENST00000470444 350 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 RPS27AP1-201ENST00000475545 471 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.16□□□□□ -1.9
SEC61A1P61619 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.16□□□□□ -1.9
SEC61A1P61619 FGF7P4-201ENST00000509595 295 ntBASIC3.16□□□□□ -1.9
SEC61A1P61619 RAC1P2-201ENST00000511164 579 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms