Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.72□□□□□ -2.13
ACTBP60709 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
ACTBP60709 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
ACTBP60709 RNU6-1078P-201ENST00000364522 103 ntBASIC1.72□□□□□ -2.13
ACTBP60709 SNORA70B-201ENST00000384210 135 ntBASIC1.72□□□□□ -2.13
ACTBP60709 USP9YP19-201ENST00000412165 485 ntBASIC1.72□□□□□ -2.13
ACTBP60709 AL161449.1-201ENST00000414531 1199 ntBASIC1.72□□□□□ -2.13
ACTBP60709 USP9YP13-201ENST00000417797 480 ntBASIC1.72□□□□□ -2.13
ACTBP60709 AL158823.1-201ENST00000418441 478 ntBASIC1.72□□□□□ -2.13
ACTBP60709 PTP4A1P7-201ENST00000423476 514 ntBASIC1.72□□□□□ -2.13
ACTBP60709 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.72□□□□□ -2.13
ACTBP60709 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.72□□□□□ -2.13
ACTBP60709 MTND4P6-201ENST00000438297 472 ntBASIC1.72□□□□□ -2.13
ACTBP60709 USP9YP8-201ENST00000441913 500 ntBASIC1.72□□□□□ -2.13
ACTBP60709 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.72□□□□□ -2.13
ACTBP60709 AL353705.4-201ENST00000449661 238 ntBASIC1.72□□□□□ -2.13
ACTBP60709 RPL18AP17-201ENST00000455326 198 ntBASIC1.72□□□□□ -2.13
ACTBP60709 RPL30P9-201ENST00000465586 330 ntBASIC1.72□□□□□ -2.13
ACTBP60709 AC020699.1-201ENST00000505161 445 ntBASIC1.72□□□□□ -2.13
ACTBP60709 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.72□□□□□ -2.13
ACTBP60709 MRPS33P3-201ENST00000513456 322 ntBASIC1.72□□□□□ -2.13
ACTBP60709 RNU6-583P-201ENST00000516012 92 ntBASIC1.72□□□□□ -2.13
ACTBP60709 RNU6-1225P-201ENST00000516336 65 ntBASIC1.72□□□□□ -2.13
ACTBP60709 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.72□□□□□ -2.13
ACTBP60709 DEFB130C-202ENST00000530001 230 ntBASIC1.72□□□□□ -2.13
ACTBP60709 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.72□□□□□ -2.13
ACTBP60709 AC106052.1-201ENST00000608029 497 ntBASIC1.72□□□□□ -2.13
ACTBP60709 AC239868.4-201ENST00000608318 671 ntBASIC1.72□□□□□ -2.13
ACTBP60709 SNORA40.19-201ENST00000390846 128 ntBASIC1.71□□□□□ -2.14
ACTBP60709 RNU6-952P-201ENST00000391164 108 ntBASIC1.71□□□□□ -2.14
ACTBP60709 RNU6-754P-201ENST00000391166 107 ntBASIC1.71□□□□□ -2.14
ACTBP60709 AL356421.1-201ENST00000403255 413 ntBASIC1.71□□□□□ -2.14
ACTBP60709 RNA5SP425-201ENST00000410336 112 ntBASIC1.71□□□□□ -2.14
ACTBP60709 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.71□□□□□ -2.14
ACTBP60709 AC007435.1-201ENST00000421086 415 ntBASIC1.71□□□□□ -2.14
ACTBP60709 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.71□□□□□ -2.14
ACTBP60709 FABP5P14-201ENST00000437273 393 ntBASIC1.71□□□□□ -2.14
ACTBP60709 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.71□□□□□ -2.14
ACTBP60709 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.71□□□□□ -2.14
ACTBP60709 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.71□□□□□ -2.14
ACTBP60709 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.71□□□□□ -2.14
ACTBP60709 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
ACTBP60709 AC104090.1-201ENST00000506341 1171 ntBASIC1.71□□□□□ -2.14
ACTBP60709 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.71□□□□□ -2.14
ACTBP60709 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.71□□□□□ -2.14
ACTBP60709 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.71□□□□□ -2.14
ACTBP60709 MTCO3P27-201ENST00000514397 196 ntBASIC1.71□□□□□ -2.14
ACTBP60709 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
ACTBP60709 RNU6-840P-201ENST00000517275 65 ntBASIC1.71□□□□□ -2.14
ACTBP60709 AP003355.1-201ENST00000518956 587 ntBASIC1.71□□□□□ -2.14
ACTBP60709 HMGN1P28-201ENST00000521340 364 ntBASIC1.71□□□□□ -2.14
ACTBP60709 HSBP1P1-201ENST00000555205 166 ntBASIC1.71□□□□□ -2.14
ACTBP60709 MIR3912-201ENST00000577566 105 ntBASIC1.71□□□□□ -2.14
ACTBP60709 AC024619.4-201ENST00000580924 316 ntBASIC1.71□□□□□ -2.14
ACTBP60709 AL359854.1-201ENST00000614203 1594 ntBASIC1.71□□□□□ -2.14
ACTBP60709 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
ACTBP60709 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
ACTBP60709 RNU6-778P-201ENST00000363269 103 ntBASIC1.7□□□□□ -2.14
ACTBP60709 RNA5SP240-201ENST00000365355 128 ntBASIC1.7□□□□□ -2.14
ACTBP60709 AL603865.2-201ENST00000401679 213 ntBASIC1.7□□□□□ -2.14
ACTBP60709 AL033519.2-201ENST00000403958 392 ntBASIC1.7□□□□□ -2.14
ACTBP60709 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.7□□□□□ -2.14
ACTBP60709 RN7SKP284-201ENST00000411002 343 ntBASIC1.7□□□□□ -2.14
ACTBP60709 RN7SKP192-201ENST00000411291 327 ntBASIC1.7□□□□□ -2.14
ACTBP60709 SNORD56-201ENST00000413522 71 ntBASIC1.7□□□□□ -2.14
ACTBP60709 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.7□□□□□ -2.14
ACTBP60709 BX119904.4-201ENST00000424402 301 ntBASIC1.7□□□□□ -2.14
ACTBP60709 SKA2P1-201ENST00000425592 390 ntBASIC1.7□□□□□ -2.14
ACTBP60709 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.7□□□□□ -2.14
ACTBP60709 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
ACTBP60709 HMGN1P5-201ENST00000448591 263 ntBASIC1.7□□□□□ -2.14
ACTBP60709 AL513124.1-201ENST00000450410 614 ntBASIC1.7□□□□□ -2.14
ACTBP60709 BX322784.1-201ENST00000455793 1077 ntBASIC1.7□□□□□ -2.14
ACTBP60709 TRBV1-201ENST00000476502 284 ntBASIC1.7□□□□□ -2.14
ACTBP60709 SNORA31.23-201ENST00000517219 133 ntBASIC1.7□□□□□ -2.14
ACTBP60709 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.7□□□□□ -2.14
ACTBP60709 CBX3P7-201ENST00000532876 502 ntBASIC1.7□□□□□ -2.14
ACTBP60709 AL049838.1-201ENST00000563647 981 ntBASIC1.7□□□□□ -2.14
ACTBP60709 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.7□□□□□ -2.14
ACTBP60709 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.7□□□□□ -2.14
ACTBP60709 AL357094.1-201ENST00000603845 844 ntBASIC1.7□□□□□ -2.14
ACTBP60709 AC009268.2-201ENST00000621925 457 ntBASIC1.7□□□□□ -2.14
ACTBP60709 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
ACTBP60709 AC009487.4-201ENST00000624969 3585 ntBASIC1.69□□□□□ -2.14
ACTBP60709 Y_RNA.408-201ENST00000383987 102 ntBASIC1.69□□□□□ -2.14
ACTBP60709 AL590084.2-201ENST00000401481 382 ntBASIC1.69□□□□□ -2.14
ACTBP60709 MTCYBP38-201ENST00000417160 1123 ntBASIC1.69□□□□□ -2.14
ACTBP60709 Z98742.3-201ENST00000418637 326 ntBASIC1.69□□□□□ -2.14
ACTBP60709 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.69□□□□□ -2.14
ACTBP60709 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.69□□□□□ -2.14
ACTBP60709 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.69□□□□□ -2.14
ACTBP60709 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.69□□□□□ -2.14
ACTBP60709 COX7BP2-201ENST00000437976 242 ntBASIC1.69□□□□□ -2.14
ACTBP60709 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ACTBP60709 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ACTBP60709 AC009238.1-201ENST00000442165 424 ntBASIC1.69□□□□□ -2.14
ACTBP60709 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
ACTBP60709 AC009237.6-201ENST00000446969 424 ntBASIC1.69□□□□□ -2.14
ACTBP60709 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.69□□□□□ -2.14
ACTBP60709 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms