Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.8□□□□□ -1.8
RHBDL3P58872 SUMO2P6-201ENST00000505273 288 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.8□□□□□ -1.8
RHBDL3P58872 AC116562.3-201ENST00000506136 177 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.8□□□□□ -1.8
RHBDL3P58872 SCARNA24.1-201ENST00000516465 137 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 RNU6-703P-201ENST00000516946 107 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 RNU6-1315P-201ENST00000517187 99 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AC090572.1-201ENST00000519251 160 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AP003122.3-201ENST00000526316 255 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 PSMA2P1-201ENST00000526365 646 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.8□□□□□ -1.8
RHBDL3P58872 AC068587.5-201ENST00000528506 175 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AC084851.1-201ENST00000529105 249 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.8□□□□□ -1.8
RHBDL3P58872 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.8□□□□□ -1.8
RHBDL3P58872 AC012213.3-201ENST00000577199 777 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.8□□□□□ -1.8
RHBDL3P58872 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.8□□□□□ -1.8
RHBDL3P58872 RSL24D1P11-201ENST00000591045 491 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AL451007.1-201ENST00000595491 289 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AC119751.7-201ENST00000600494 245 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.8□□□□□ -1.8
RHBDL3P58872 AL035413.2-201ENST00000604801 525 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AC004832.5-201ENST00000608677 401 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AC006566.1-201ENST00000608943 513 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 uc_338.25-201ENST00000613756 156 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AC130324.3-201ENST00000614165 542 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 ATP5A1P2-202ENST00000616464 443 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
RHBDL3P58872 RIOK3P1-201ENST00000418778 1528 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RHBDL3P58872 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RHBDL3P58872 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RHBDL3P58872 RNU6-395P-201ENST00000365662 106 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.79□□□□□ -1.8
RHBDL3P58872 RNU6-1042P-201ENST00000384204 107 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.79□□□□□ -1.8
RHBDL3P58872 BX295541.1-201ENST00000417774 250 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 BPY2DP-201ENST00000422208 265 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.79□□□□□ -1.8
RHBDL3P58872 MTCO1P19-201ENST00000443487 500 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 RPS15AP27-201ENST00000449183 343 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.79□□□□□ -1.8
RHBDL3P58872 AC004924.1-201ENST00000480160 781 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 RPS27AP10-201ENST00000496103 208 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 AC109927.2-201ENST00000506416 303 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.79□□□□□ -1.8
RHBDL3P58872 MTCO3P28-201ENST00000513351 515 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 AC010493.1-201ENST00000513479 292 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.79□□□□□ -1.8
RHBDL3P58872 RN7SKP282-201ENST00000516824 299 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 RNU6-430P-201ENST00000517078 107 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 OR5B19P-201ENST00000531766 928 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.79□□□□□ -1.8
RHBDL3P58872 AC006362.1-201ENST00000567392 174 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 AL391840.1-201ENST00000571144 367 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 MIR4528-201ENST00000577763 90 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.79□□□□□ -1.8
RHBDL3P58872 AC013562.2-201ENST00000611632 603 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 AC012409.4-201ENST00000612923 249 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 AC009090.3-201ENST00000616553 565 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 MIR3199-2-201ENST00000636243 86 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RHBDL3P58872 MTND5P17-201ENST00000418405 1603 ntBASIC3.79□□□□□ -1.8
RHBDL3P58872 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.79□□□□□ -1.8
RHBDL3P58872 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.79□□□□□ -1.8
RHBDL3P58872 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.78□□□□□ -1.8
RHBDL3P58872 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
RHBDL3P58872 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RHBDL3P58872 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RHBDL3P58872 OR5J1P-201ENST00000313544 939 ntBASIC3.78□□□□□ -1.8
RHBDL3P58872 NACAP2-201ENST00000318548 624 ntBASIC3.78□□□□□ -1.8
RHBDL3P58872 Y_RNA.22-201ENST00000362492 102 ntBASIC3.78□□□□□ -1.8
RHBDL3P58872 SNORA75-201ENST00000384158 137 ntBASIC3.78□□□□□ -1.8
RHBDL3P58872 CDK8P2-201ENST00000415020 547 ntBASIC3.78□□□□□ -1.8
RHBDL3P58872 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.78□□□□□ -1.8
RHBDL3P58872 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.78□□□□□ -1.8
RHBDL3P58872 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.78□□□□□ -1.8
RHBDL3P58872 MRPS31P2-201ENST00000451581 518 ntBASIC3.78□□□□□ -1.8
RHBDL3P58872 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.78□□□□□ -1.8
RHBDL3P58872 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.78□□□□□ -1.8
RHBDL3P58872 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.78□□□□□ -1.8
RHBDL3P58872 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RHBDL3P58872 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RHBDL3P58872 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.78□□□□□ -1.8
RHBDL3P58872 TGIF1P1-201ENST00000558095 802 ntBASIC3.78□□□□□ -1.8
RHBDL3P58872 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.78□□□□□ -1.8
RHBDL3P58872 H3F3AP1-201ENST00000559984 334 ntBASIC3.78□□□□□ -1.8
RHBDL3P58872 MIR1273C-201ENST00000578669 77 ntBASIC3.78□□□□□ -1.8
RHBDL3P58872 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.78□□□□□ -1.8
RHBDL3P58872 AC073648.5-201ENST00000603502 305 ntBASIC3.78□□□□□ -1.8
RHBDL3P58872 AC048344.4-201ENST00000619744 527 ntBASIC3.78□□□□□ -1.8
RHBDL3P58872 UCA1.1-201ENST00000620952 75 ntBASIC3.78□□□□□ -1.8
RHBDL3P58872 AC090617.7-201ENST00000623952 126 ntBASIC3.78□□□□□ -1.8
RHBDL3P58872 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RHBDL3P58872 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RHBDL3P58872 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms