Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CLRN1P58418 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLRN1P58418 AL049641.1-201ENST00000441055 1948 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CLRN1P58418 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLRN1P58418 PNPT1P2-201ENST00000456768 2050 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CLRN1P58418 Y_RNA.33-201ENST00000362591 102 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 Y_RNA.145-201ENST00000363527 102 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 RNA5SP513-201ENST00000364648 118 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 Y_RNA.324-201ENST00000365165 102 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 RNU6-1329P-201ENST00000365664 107 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.69□□□□□ -1.82
CLRN1P58418 Z99755.1-201ENST00000414048 380 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 CYP4F29P-201ENST00000420685 446 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 AL158156.1-201ENST00000422509 473 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLRN1P58418 AL356867.1-201ENST00000429623 299 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 USP9YP30-201ENST00000430729 455 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 AL645568.3-201ENST00000433683 316 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.69□□□□□ -1.82
CLRN1P58418 RNU7-187P-201ENST00000458985 68 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 UQCRHP4-201ENST00000471686 272 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.69□□□□□ -1.82
CLRN1P58418 AL160314.1-201ENST00000490836 438 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 RPL29P14-201ENST00000495837 428 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.69□□□□□ -1.82
CLRN1P58418 RNU6-976P-201ENST00000516086 111 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 RAB9BP1-201ENST00000519581 626 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 AP003122.3-201ENST00000526316 255 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.69□□□□□ -1.82
CLRN1P58418 AC084851.1-201ENST00000529105 249 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.69□□□□□ -1.82
CLRN1P58418 TRAV37-201ENST00000553906 342 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.69□□□□□ -1.82
CLRN1P58418 MIR4284-201ENST00000578924 81 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 OR1M4P-201ENST00000589199 287 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.69□□□□□ -1.82
CLRN1P58418 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLRN1P58418 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CLRN1P58418 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CLRN1P58418 AC005183.1-201ENST00000603687 1979 ntBASIC3.69□□□□□ -1.82
CLRN1P58418 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLRN1P58418 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLRN1P58418 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLRN1P58418 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.68□□□□□ -1.82
CLRN1P58418 AC010733.2-201ENST00000589496 5702 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLRN1P58418 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.68□□□□□ -1.82
CLRN1P58418 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.68□□□□□ -1.82
CLRN1P58418 MIR448-201ENST00000362131 111 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 Y_RNA.5-201ENST00000362334 102 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 RNU6-1115P-201ENST00000362490 106 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 Y_RNA.245-201ENST00000364493 95 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 RNU6-395P-201ENST00000365662 106 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CLRN1P58418 MIR1290-201ENST00000408735 78 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 RNU6-1025P-201ENST00000410629 104 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 RNU6-293P-201ENST00000411259 106 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 UBE2D3P2-201ENST00000424409 445 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.68□□□□□ -1.82
CLRN1P58418 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.68□□□□□ -1.82
CLRN1P58418 AC069285.2-201ENST00000440210 275 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 FABP5P15-201ENST00000453566 214 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 SNORD5.1-201ENST00000458800 75 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 S100A11P1-201ENST00000477525 312 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 HMGB1P30-201ENST00000492455 606 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 CEACAMP10-202ENST00000495431 496 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 AC078918.1-201ENST00000498515 228 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 AC099522.1-202ENST00000514718 367 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 RN7SKP295-201ENST00000517264 153 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.68□□□□□ -1.82
CLRN1P58418 ATP5F1P5-201ENST00000526403 760 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.68□□□□□ -1.82
CLRN1P58418 DNAJC8P1-201ENST00000554535 372 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.68□□□□□ -1.82
CLRN1P58418 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.68□□□□□ -1.82
CLRN1P58418 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.68□□□□□ -1.82
CLRN1P58418 ARF4P1-201ENST00000605447 541 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.68□□□□□ -1.82
CLRN1P58418 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.68□□□□□ -1.82
CLRN1P58418 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLRN1P58418 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLRN1P58418 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLRN1P58418 LINC02471-203ENST00000641941 4752 ntBASIC3.68□□□□□ -1.82
CLRN1P58418 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLRN1P58418 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLRN1P58418 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLRN1P58418 MTND5P30-201ENST00000452896 1731 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLRN1P58418 SNORD35B-201ENST00000363660 87 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 RNU6-1059P-201ENST00000363752 98 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 RNU1-32P-201ENST00000363937 159 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 SNORA75.6-201ENST00000391318 127 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 RPL21P66-201ENST00000426566 466 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.67□□□□□ -1.82
CLRN1P58418 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.67□□□□□ -1.82
CLRN1P58418 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.67□□□□□ -1.82
CLRN1P58418 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.67□□□□□ -1.82
CLRN1P58418 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms