Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC078814.3-201ENST00000553036 491 ntBASIC2.12□□□□□ -2.07
VSX2P58304 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.12□□□□□ -2.07
VSX2P58304 MIR4648-201ENST00000580107 72 ntBASIC2.12□□□□□ -2.07
VSX2P58304 MIR544B-201ENST00000582372 78 ntBASIC2.12□□□□□ -2.07
VSX2P58304 RPP40P2-201ENST00000603596 712 ntBASIC2.12□□□□□ -2.07
VSX2P58304 AL355877.2-201ENST00000603670 358 ntBASIC2.12□□□□□ -2.07
VSX2P58304 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VSX2P58304 BCRP9-201ENST00000605312 388 ntBASIC2.12□□□□□ -2.07
VSX2P58304 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.12□□□□□ -2.07
VSX2P58304 AC092106.3-201ENST00000611308 722 ntBASIC2.12□□□□□ -2.07
VSX2P58304 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
VSX2P58304 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.12□□□□□ -2.07
VSX2P58304 AL109620.1-201ENST00000618738 1197 ntBASIC2.12□□□□□ -2.07
VSX2P58304 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.12□□□□□ -2.07
VSX2P58304 AP000676.3-201ENST00000623299 569 ntBASIC2.12□□□□□ -2.07
VSX2P58304 AL136313.1-201ENST00000624804 202 ntBASIC2.12□□□□□ -2.07
VSX2P58304 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.12□□□□□ -2.07
VSX2P58304 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
VSX2P58304 RNU6-723P-201ENST00000383973 107 ntBASIC2.11□□□□□ -2.07
VSX2P58304 RN7SKP266-201ENST00000410232 287 ntBASIC2.11□□□□□ -2.07
VSX2P58304 RNU4-72P-201ENST00000410754 173 ntBASIC2.11□□□□□ -2.07
VSX2P58304 RPL21P24-201ENST00000413752 448 ntBASIC2.11□□□□□ -2.07
VSX2P58304 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.11□□□□□ -2.07
VSX2P58304 USP9YP27-201ENST00000418455 438 ntBASIC2.11□□□□□ -2.07
VSX2P58304 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.11□□□□□ -2.07
VSX2P58304 AC083875.1-201ENST00000419509 405 ntBASIC2.11□□□□□ -2.07
VSX2P58304 DPH3P2-201ENST00000422618 250 ntBASIC2.11□□□□□ -2.07
VSX2P58304 AL358075.3-201ENST00000426289 226 ntBASIC2.11□□□□□ -2.07
VSX2P58304 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.11□□□□□ -2.07
VSX2P58304 HSFY7P-201ENST00000432672 318 ntBASIC2.11□□□□□ -2.07
VSX2P58304 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.11□□□□□ -2.07
VSX2P58304 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.11□□□□□ -2.07
VSX2P58304 RPL35AP22-201ENST00000436855 335 ntBASIC2.11□□□□□ -2.07
VSX2P58304 HSFY8P-201ENST00000437934 318 ntBASIC2.11□□□□□ -2.07
VSX2P58304 AL445687.1-201ENST00000439946 251 ntBASIC2.11□□□□□ -2.07
VSX2P58304 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VSX2P58304 AL031659.1-201ENST00000447075 539 ntBASIC2.11□□□□□ -2.07
VSX2P58304 HSFY5P-201ENST00000453726 309 ntBASIC2.11□□□□□ -2.07
VSX2P58304 AC233279.1-201ENST00000455300 423 ntBASIC2.11□□□□□ -2.07
VSX2P58304 AC055855.1-201ENST00000489563 579 ntBASIC2.11□□□□□ -2.07
VSX2P58304 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.11□□□□□ -2.07
VSX2P58304 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VSX2P58304 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.11□□□□□ -2.07
VSX2P58304 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
VSX2P58304 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.11□□□□□ -2.07
VSX2P58304 AC093809.1-201ENST00000509155 340 ntBASIC2.11□□□□□ -2.07
VSX2P58304 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
VSX2P58304 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.11□□□□□ -2.07
VSX2P58304 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.11□□□□□ -2.07
VSX2P58304 HMGN1P28-201ENST00000521340 364 ntBASIC2.11□□□□□ -2.07
VSX2P58304 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.11□□□□□ -2.07
VSX2P58304 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.11□□□□□ -2.07
VSX2P58304 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.11□□□□□ -2.07
VSX2P58304 SNRPGP18-201ENST00000553000 214 ntBASIC2.11□□□□□ -2.07
VSX2P58304 AC026464.5-201ENST00000562497 722 ntBASIC2.11□□□□□ -2.07
VSX2P58304 MIR1273D-201ENST00000577266 86 ntBASIC2.11□□□□□ -2.07
VSX2P58304 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.11□□□□□ -2.07
VSX2P58304 AL592221.1-201ENST00000605266 382 ntBASIC2.11□□□□□ -2.07
VSX2P58304 AC004805.2-201ENST00000605382 482 ntBASIC2.11□□□□□ -2.07
VSX2P58304 AC013470.4-201ENST00000619978 986 ntBASIC2.11□□□□□ -2.07
VSX2P58304 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.11□□□□□ -2.07
VSX2P58304 MIR203B-201ENST00000636080 86 ntBASIC2.11□□□□□ -2.07
VSX2P58304 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.11□□□□□ -2.07
VSX2P58304 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VSX2P58304 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.1□□□□□ -2.07
VSX2P58304 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.1□□□□□ -2.07
VSX2P58304 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.1□□□□□ -2.07
VSX2P58304 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.1□□□□□ -2.07
VSX2P58304 AL596028.1-201ENST00000326971 197 ntBASIC2.1□□□□□ -2.07
VSX2P58304 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VSX2P58304 RNU6-157P-201ENST00000383957 107 ntBASIC2.1□□□□□ -2.07
VSX2P58304 SNORA11.4-201ENST00000408823 129 ntBASIC2.1□□□□□ -2.07
VSX2P58304 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.1□□□□□ -2.07
VSX2P58304 SSR1P2-201ENST00000415208 787 ntBASIC2.1□□□□□ -2.07
VSX2P58304 USP9YP13-201ENST00000417797 480 ntBASIC2.1□□□□□ -2.07
VSX2P58304 USP9YP26-201ENST00000421008 661 ntBASIC2.1□□□□□ -2.07
VSX2P58304 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.1□□□□□ -2.07
VSX2P58304 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.1□□□□□ -2.07
VSX2P58304 PGBD4P3-201ENST00000440731 581 ntBASIC2.1□□□□□ -2.07
VSX2P58304 AC020550.1-201ENST00000447385 163 ntBASIC2.1□□□□□ -2.07
VSX2P58304 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.1□□□□□ -2.07
VSX2P58304 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.1□□□□□ -2.07
VSX2P58304 snoU13.26-201ENST00000459452 105 ntBASIC2.1□□□□□ -2.07
VSX2P58304 AC090096.1-201ENST00000489168 390 ntBASIC2.1□□□□□ -2.07
VSX2P58304 AL160314.1-201ENST00000490836 438 ntBASIC2.1□□□□□ -2.07
VSX2P58304 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.1□□□□□ -2.07
VSX2P58304 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.1□□□□□ -2.07
VSX2P58304 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.1□□□□□ -2.07
VSX2P58304 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.1□□□□□ -2.07
VSX2P58304 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.1□□□□□ -2.07
VSX2P58304 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.1□□□□□ -2.07
VSX2P58304 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.1□□□□□ -2.07
VSX2P58304 AC136618.2-201ENST00000575091 400 ntBASIC2.1□□□□□ -2.07
VSX2P58304 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.1□□□□□ -2.07
VSX2P58304 MIR3117-201ENST00000584034 78 ntBASIC2.1□□□□□ -2.07
VSX2P58304 AC005498.1-201ENST00000592125 465 ntBASIC2.1□□□□□ -2.07
VSX2P58304 BNIP3P39-201ENST00000601077 554 ntBASIC2.1□□□□□ -2.07
VSX2P58304 AP000403.1-201ENST00000603349 851 ntBASIC2.1□□□□□ -2.07
VSX2P58304 AL356280.1-201ENST00000603614 379 ntBASIC2.1□□□□□ -2.07
VSX2P58304 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms