Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC015795.1-201ENST00000513669 327 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.07□□□□□ -1.76
GFRA1P56159 RNU6-1282P-201ENST00000516735 96 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.07□□□□□ -1.76
GFRA1P56159 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.07□□□□□ -1.76
GFRA1P56159 AC103996.1-201ENST00000555468 102 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.07□□□□□ -1.76
GFRA1P56159 BPIFA4P-203ENST00000603168 689 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 AL355598.1-201ENST00000604169 202 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 MIR378J-201ENST00000611988 109 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 AL138825.1-201ENST00000618587 192 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 AL606534.2-204ENST00000635008 178 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA1P56159 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA1P56159 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA1P56159 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.07□□□□□ -1.76
GFRA1P56159 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
GFRA1P56159 OR51H2P-202ENST00000641424 3046 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA1P56159 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA1P56159 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
GFRA1P56159 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA1P56159 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
GFRA1P56159 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA1P56159 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.06□□□□□ -1.76
GFRA1P56159 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
GFRA1P56159 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
GFRA1P56159 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
GFRA1P56159 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.06□□□□□ -1.76
GFRA1P56159 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
GFRA1P56159 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
GFRA1P56159 RNU6-99P-201ENST00000364721 107 ntBASIC4.06□□□□□ -1.76
GFRA1P56159 Y_RNA.424-201ENST00000384063 103 ntBASIC4.06□□□□□ -1.76
GFRA1P56159 RNU6-574P-201ENST00000384265 107 ntBASIC4.06□□□□□ -1.76
GFRA1P56159 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
GFRA1P56159 MIR921-201ENST00000401133 56 ntBASIC4.06□□□□□ -1.76
GFRA1P56159 RPL17P36-201ENST00000420302 549 ntBASIC4.06□□□□□ -1.76
GFRA1P56159 RPL7P2-201ENST00000427639 268 ntBASIC4.06□□□□□ -1.76
GFRA1P56159 RPL21P91-201ENST00000429231 479 ntBASIC4.06□□□□□ -1.76
GFRA1P56159 AL159987.2-201ENST00000432754 307 ntBASIC4.06□□□□□ -1.76
GFRA1P56159 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.06□□□□□ -1.76
GFRA1P56159 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.06□□□□□ -1.76
GFRA1P56159 RNU2-58P-201ENST00000516403 183 ntBASIC4.06□□□□□ -1.76
GFRA1P56159 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.06□□□□□ -1.76
GFRA1P56159 AP005902.1-201ENST00000521358 186 ntBASIC4.06□□□□□ -1.76
GFRA1P56159 COX6CP5-201ENST00000527162 228 ntBASIC4.06□□□□□ -1.76
GFRA1P56159 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.06□□□□□ -1.76
GFRA1P56159 HSBP1P1-201ENST00000555205 166 ntBASIC4.06□□□□□ -1.76
GFRA1P56159 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.06□□□□□ -1.76
GFRA1P56159 MIR4277-201ENST00000578298 84 ntBASIC4.06□□□□□ -1.76
GFRA1P56159 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.06□□□□□ -1.76
GFRA1P56159 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.06□□□□□ -1.76
GFRA1P56159 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
GFRA1P56159 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.06□□□□□ -1.76
GFRA1P56159 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.06□□□□□ -1.76
GFRA1P56159 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.06□□□□□ -1.76
GFRA1P56159 MAPK10-286ENST00000641208 8747 ntBASIC4.06□□□□□ -1.76
GFRA1P56159 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
GFRA1P56159 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.06□□□□□ -1.76
GFRA1P56159 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA1P56159 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA1P56159 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA1P56159 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA1P56159 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.05□□□□□ -1.76
GFRA1P56159 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.05□□□□□ -1.76
GFRA1P56159 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA1P56159 Y_RNA.176-201ENST00000363815 109 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA1P56159 TMSB10P2-201ENST00000416049 131 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.05□□□□□ -1.76
GFRA1P56159 NUP35P1-201ENST00000422734 947 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 FTH1P6-201ENST00000430768 320 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.05□□□□□ -1.76
GFRA1P56159 AC012671.1-201ENST00000451912 203 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.05□□□□□ -1.76
GFRA1P56159 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.05□□□□□ -1.76
GFRA1P56159 RNU6-377P-201ENST00000515965 102 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 Y_RNA.687-201ENST00000516558 91 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 RNU4-77P-201ENST00000516692 156 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 RNU7-4P-201ENST00000516961 62 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA1P56159 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA1P56159 AC113195.1-201ENST00000579952 141 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 RNF138P2-201ENST00000603490 592 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 AL139395.1-201ENST00000603662 160 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 AC104695.3-201ENST00000604052 296 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 MIR8076-201ENST00000611401 83 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 AC010205.1-201ENST00000616668 449 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
GFRA1P56159 MIR6810-201ENST00000622701 70 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 SCARNA4-202ENST00000625402 129 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.05□□□□□ -1.76
GFRA1P56159 AC022336.2-201ENST00000568966 2538 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA1P56159 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA1P56159 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA1P56159 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA1P56159 FAM35BP-202ENST00000497389 3337 ntBASIC4.05□□□□□ -1.76
GFRA1P56159 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA1P56159 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms