Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.27□□□□□ -2.21
GTF2A1P52655 SNORA25.15-201ENST00000516487 89 ntBASIC1.27□□□□□ -2.21
GTF2A1P52655 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
GTF2A1P52655 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.27□□□□□ -2.21
GTF2A1P52655 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.27□□□□□ -2.21
GTF2A1P52655 AL020997.3-201ENST00000602843 359 ntBASIC1.27□□□□□ -2.21
GTF2A1P52655 AC009974.1-201ENST00000608881 455 ntBASIC1.27□□□□□ -2.21
GTF2A1P52655 AC091834.1-201ENST00000614543 472 ntBASIC1.27□□□□□ -2.21
GTF2A1P52655 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.27□□□□□ -2.21
GTF2A1P52655 MTCO1P18-201ENST00000455518 1419 ntBASIC1.26□□□□□ -2.21
GTF2A1P52655 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
GTF2A1P52655 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.26□□□□□ -2.21
GTF2A1P52655 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
GTF2A1P52655 MIR517C-201ENST00000385103 95 ntBASIC1.26□□□□□ -2.21
GTF2A1P52655 RNU6-77P-201ENST00000410554 91 ntBASIC1.26□□□□□ -2.21
GTF2A1P52655 OR51A3P-201ENST00000413596 924 ntBASIC1.26□□□□□ -2.21
GTF2A1P52655 OR51A5P-201ENST00000415429 942 ntBASIC1.26□□□□□ -2.21
GTF2A1P52655 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.26□□□□□ -2.21
GTF2A1P52655 MTND2P29-201ENST00000438595 412 ntBASIC1.26□□□□□ -2.21
GTF2A1P52655 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.26□□□□□ -2.21
GTF2A1P52655 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.26□□□□□ -2.21
GTF2A1P52655 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.26□□□□□ -2.21
GTF2A1P52655 RPS20P22-201ENST00000473700 357 ntBASIC1.26□□□□□ -2.21
GTF2A1P52655 UBE2DNL-203ENST00000474922 222 ntBASIC1.26□□□□□ -2.21
GTF2A1P52655 AC099513.1-201ENST00000490423 301 ntBASIC1.26□□□□□ -2.21
GTF2A1P52655 AC139453.3-201ENST00000493276 369 ntBASIC1.26□□□□□ -2.21
GTF2A1P52655 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
GTF2A1P52655 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.26□□□□□ -2.21
GTF2A1P52655 ATP5F1P7-201ENST00000567330 760 ntBASIC1.26□□□□□ -2.21
GTF2A1P52655 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.26□□□□□ -2.21
GTF2A1P52655 AC024581.2-201ENST00000619986 252 ntBASIC1.26□□□□□ -2.21
GTF2A1P52655 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.26□□□□□ -2.21
GTF2A1P52655 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.26□□□□□ -2.21
GTF2A1P52655 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
GTF2A1P52655 MTCO1P23-201ENST00000415223 1526 ntBASIC1.25□□□□□ -2.21
GTF2A1P52655 RNU6-40P-201ENST00000384254 107 ntBASIC1.25□□□□□ -2.21
GTF2A1P52655 MIR525-201ENST00000384978 85 ntBASIC1.25□□□□□ -2.21
GTF2A1P52655 MIR618-201ENST00000385287 98 ntBASIC1.25□□□□□ -2.21
GTF2A1P52655 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.25□□□□□ -2.21
GTF2A1P52655 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.25□□□□□ -2.21
GTF2A1P52655 BPY2DP-201ENST00000422208 265 ntBASIC1.25□□□□□ -2.21
GTF2A1P52655 EIF4EP2-201ENST00000422816 654 ntBASIC1.25□□□□□ -2.21
GTF2A1P52655 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.25□□□□□ -2.21
GTF2A1P52655 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.25□□□□□ -2.21
GTF2A1P52655 OR2A41P-201ENST00000473586 105 ntBASIC1.25□□□□□ -2.21
GTF2A1P52655 TRBV12-1-201ENST00000479785 344 ntBASIC1.25□□□□□ -2.21
GTF2A1P52655 FAM92A1P2-202ENST00000504766 877 ntBASIC1.25□□□□□ -2.21
GTF2A1P52655 IGJP1-201ENST00000522682 475 ntBASIC1.25□□□□□ -2.21
GTF2A1P52655 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.25□□□□□ -2.21
GTF2A1P52655 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.25□□□□□ -2.21
GTF2A1P52655 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.25□□□□□ -2.21
GTF2A1P52655 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.25□□□□□ -2.21
GTF2A1P52655 AC091953.2-201ENST00000623979 160 ntBASIC1.25□□□□□ -2.21
GTF2A1P52655 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.25□□□□□ -2.21
GTF2A1P52655 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
GTF2A1P52655 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
GTF2A1P52655 MIR424-201ENST00000362227 98 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 RNU4-13P-201ENST00000364019 141 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.24□□□□□ -2.21
GTF2A1P52655 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
GTF2A1P52655 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.24□□□□□ -2.21
GTF2A1P52655 PSMA6P3-201ENST00000428242 164 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 MTND5P25-201ENST00000430499 799 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 SNRPGP13-201ENST00000442212 177 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 HMGN2P23-201ENST00000456759 269 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 COX7A2P2-201ENST00000505291 250 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
GTF2A1P52655 RNA5SP112-201ENST00000515937 99 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 RNU6-416P-201ENST00000516265 103 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 AC034114.1-201ENST00000520293 285 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 AC015720.1-201ENST00000565251 277 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 AC104763.2-201ENST00000604179 382 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 AC021646.1-201ENST00000605469 484 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 AC021755.4-201ENST00000616620 456 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.24□□□□□ -2.21
GTF2A1P52655 AL118508.4-201ENST00000624142 1176 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 AL359854.1-201ENST00000614203 1594 ntBASIC1.24□□□□□ -2.21
GTF2A1P52655 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
GTF2A1P52655 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
GTF2A1P52655 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
GTF2A1P52655 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
GTF2A1P52655 AL109755.1-201ENST00000401791 649 ntBASIC1.23□□□□□ -2.21
GTF2A1P52655 AL139098.1-201ENST00000407291 389 ntBASIC1.23□□□□□ -2.21
GTF2A1P52655 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.23□□□□□ -2.21
GTF2A1P52655 AL160275.3-201ENST00000423876 471 ntBASIC1.23□□□□□ -2.21
GTF2A1P52655 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.23□□□□□ -2.21
GTF2A1P52655 RSU1P2-202ENST00000437884 485 ntBASIC1.23□□□□□ -2.21
GTF2A1P52655 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.23□□□□□ -2.21
GTF2A1P52655 PTENP1-201ENST00000447117 1215 ntBASIC1.23□□□□□ -2.21
GTF2A1P52655 NDUFA5P7-201ENST00000452914 242 ntBASIC1.23□□□□□ -2.21
GTF2A1P52655 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.23□□□□□ -2.21
GTF2A1P52655 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.23□□□□□ -2.21
GTF2A1P52655 SMURF2P1-201ENST00000514992 481 ntBASIC1.23□□□□□ -2.21
GTF2A1P52655 RNA5SP291-201ENST00000517222 105 ntBASIC1.23□□□□□ -2.21
GTF2A1P52655 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
GTF2A1P52655 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
GTF2A1P52655 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
GTF2A1P52655 AL359212.1-201ENST00000556608 614 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms