Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.7□□□□□ -1.82
NEK3P51956 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.7□□□□□ -1.82
NEK3P51956 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.7□□□□□ -1.82
NEK3P51956 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.7□□□□□ -1.82
NEK3P51956 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NEK3P51956 AC119674.1-207ENST00000641355 633 ntBASIC3.7□□□□□ -1.82
NEK3P51956 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NEK3P51956 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.7□□□□□ -1.82
NEK3P51956 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NEK3P51956 RNA5SP119-201ENST00000362715 117 ntBASIC3.69□□□□□ -1.82
NEK3P51956 RNU6-996P-201ENST00000365438 107 ntBASIC3.69□□□□□ -1.82
NEK3P51956 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NEK3P51956 RNU6-1027P-201ENST00000383998 107 ntBASIC3.69□□□□□ -1.82
NEK3P51956 Y_RNA.505-201ENST00000384489 102 ntBASIC3.69□□□□□ -1.82
NEK3P51956 MIR7-3-201ENST00000384898 110 ntBASIC3.69□□□□□ -1.82
NEK3P51956 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NEK3P51956 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.69□□□□□ -1.82
NEK3P51956 AL136116.1-201ENST00000403591 381 ntBASIC3.69□□□□□ -1.82
NEK3P51956 RNU6-1025P-201ENST00000410629 104 ntBASIC3.69□□□□□ -1.82
NEK3P51956 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.69□□□□□ -1.82
NEK3P51956 SKA2P1-201ENST00000425592 390 ntBASIC3.69□□□□□ -1.82
NEK3P51956 MTCO3P30-201ENST00000426425 670 ntBASIC3.69□□□□□ -1.82
NEK3P51956 AC006989.1-201ENST00000427212 131 ntBASIC3.69□□□□□ -1.82
NEK3P51956 YME1L1P1-201ENST00000429435 297 ntBASIC3.69□□□□□ -1.82
NEK3P51956 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.69□□□□□ -1.82
NEK3P51956 HMGN2P31-201ENST00000432430 273 ntBASIC3.69□□□□□ -1.82
NEK3P51956 CYCSP32-201ENST00000440548 321 ntBASIC3.69□□□□□ -1.82
NEK3P51956 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.69□□□□□ -1.82
NEK3P51956 AC233702.1-201ENST00000482905 502 ntBASIC3.69□□□□□ -1.82
NEK3P51956 RPL36AP51-201ENST00000487216 318 ntBASIC3.69□□□□□ -1.82
NEK3P51956 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.69□□□□□ -1.82
NEK3P51956 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.69□□□□□ -1.82
NEK3P51956 Y_RNA.693-201ENST00000516641 110 ntBASIC3.69□□□□□ -1.82
NEK3P51956 AP006245.1-201ENST00000522549 120 ntBASIC3.69□□□□□ -1.82
NEK3P51956 AC016957.1-201ENST00000534895 309 ntBASIC3.69□□□□□ -1.82
NEK3P51956 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.69□□□□□ -1.82
NEK3P51956 HMGB1P33-201ENST00000563485 527 ntBASIC3.69□□□□□ -1.82
NEK3P51956 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.69□□□□□ -1.82
NEK3P51956 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.69□□□□□ -1.82
NEK3P51956 AC007938.3-201ENST00000604965 623 ntBASIC3.69□□□□□ -1.82
NEK3P51956 U3.45-201ENST00000607547 219 ntBASIC3.69□□□□□ -1.82
NEK3P51956 SNORD39.4-201ENST00000620099 78 ntBASIC3.69□□□□□ -1.82
NEK3P51956 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.69□□□□□ -1.82
NEK3P51956 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.69□□□□□ -1.82
NEK3P51956 AC110491.1-201ENST00000562191 2010 ntBASIC3.69□□□□□ -1.82
NEK3P51956 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.69□□□□□ -1.82
NEK3P51956 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
NEK3P51956 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.69□□□□□ -1.82
NEK3P51956 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.69□□□□□ -1.82
NEK3P51956 ELF2P3-201ENST00000445099 1506 ntBASIC3.69□□□□□ -1.82
NEK3P51956 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.69□□□□□ -1.82
NEK3P51956 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.69□□□□□ -1.82
NEK3P51956 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.69□□□□□ -1.82
NEK3P51956 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.69□□□□□ -1.82
NEK3P51956 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
NEK3P51956 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NEK3P51956 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NEK3P51956 OR4G2P-201ENST00000328113 903 ntBASIC3.68□□□□□ -1.82
NEK3P51956 MIR412-201ENST00000362142 91 ntBASIC3.68□□□□□ -1.82
NEK3P51956 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NEK3P51956 RNU6-1158P-201ENST00000391167 107 ntBASIC3.68□□□□□ -1.82
NEK3P51956 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.68□□□□□ -1.82
NEK3P51956 AC068533.1-201ENST00000418542 415 ntBASIC3.68□□□□□ -1.82
NEK3P51956 BPY2DP-201ENST00000422208 265 ntBASIC3.68□□□□□ -1.82
NEK3P51956 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NEK3P51956 AL353729.1-201ENST00000425044 720 ntBASIC3.68□□□□□ -1.82
NEK3P51956 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.68□□□□□ -1.82
NEK3P51956 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.68□□□□□ -1.82
NEK3P51956 AL163973.1-201ENST00000484753 577 ntBASIC3.68□□□□□ -1.82
NEK3P51956 RPS27AP10-201ENST00000496103 208 ntBASIC3.68□□□□□ -1.82
NEK3P51956 AC009646.1-201ENST00000510455 318 ntBASIC3.68□□□□□ -1.82
NEK3P51956 AC104136.1-201ENST00000512969 394 ntBASIC3.68□□□□□ -1.82
NEK3P51956 LRRC34P2-201ENST00000514850 553 ntBASIC3.68□□□□□ -1.82
NEK3P51956 RN7SKP219-201ENST00000516825 296 ntBASIC3.68□□□□□ -1.82
NEK3P51956 AC009902.1-201ENST00000519351 183 ntBASIC3.68□□□□□ -1.82
NEK3P51956 AC022634.1-201ENST00000520765 532 ntBASIC3.68□□□□□ -1.82
NEK3P51956 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.68□□□□□ -1.82
NEK3P51956 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.68□□□□□ -1.82
NEK3P51956 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.68□□□□□ -1.82
NEK3P51956 AC008011.1-201ENST00000545989 227 ntBASIC3.68□□□□□ -1.82
NEK3P51956 H3F3AP1-201ENST00000559984 334 ntBASIC3.68□□□□□ -1.82
NEK3P51956 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.68□□□□□ -1.82
NEK3P51956 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.68□□□□□ -1.82
NEK3P51956 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.68□□□□□ -1.82
NEK3P51956 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.68□□□□□ -1.82
NEK3P51956 AC007621.1-201ENST00000604544 437 ntBASIC3.68□□□□□ -1.82
NEK3P51956 AC126118.1-201ENST00000607744 628 ntBASIC3.68□□□□□ -1.82
NEK3P51956 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NEK3P51956 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
NEK3P51956 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NEK3P51956 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.67□□□□□ -1.82
NEK3P51956 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NEK3P51956 AC006020.1-201ENST00000420179 1854 ntBASIC3.67□□□□□ -1.82
NEK3P51956 MTND4P14-201ENST00000435799 1354 ntBASIC3.67□□□□□ -1.82
NEK3P51956 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NEK3P51956 Y_RNA.255-201ENST00000364581 97 ntBASIC3.67□□□□□ -1.82
NEK3P51956 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.67□□□□□ -1.82
NEK3P51956 SNORA40C-201ENST00000391285 128 ntBASIC3.67□□□□□ -1.82
NEK3P51956 RPL17P50-201ENST00000396131 546 ntBASIC3.67□□□□□ -1.82
NEK3P51956 UBE2V1P2-201ENST00000397758 440 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms