Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.97□□□□□ -1.93
LHX1P48742 AL122001.1-201ENST00000457027 370 ntBASIC2.97□□□□□ -1.93
LHX1P48742 AL031183.1-201ENST00000457667 207 ntBASIC2.97□□□□□ -1.93
LHX1P48742 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
LHX1P48742 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.97□□□□□ -1.93
LHX1P48742 AC004924.1-201ENST00000480160 781 ntBASIC2.97□□□□□ -1.93
LHX1P48742 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX1P48742 RNA5SP385-201ENST00000515947 110 ntBASIC2.97□□□□□ -1.93
LHX1P48742 SNORA31.3-201ENST00000516029 96 ntBASIC2.97□□□□□ -1.93
LHX1P48742 HMGB1P41-201ENST00000520234 440 ntBASIC2.97□□□□□ -1.93
LHX1P48742 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.97□□□□□ -1.93
LHX1P48742 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.97□□□□□ -1.93
LHX1P48742 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX1P48742 MIR4506-201ENST00000584693 77 ntBASIC2.97□□□□□ -1.93
LHX1P48742 AC064872.1-201ENST00000604823 1072 ntBASIC2.97□□□□□ -1.93
LHX1P48742 ATP1B3P1-201ENST00000605365 821 ntBASIC2.97□□□□□ -1.93
LHX1P48742 AL161734.1-201ENST00000609720 557 ntBASIC2.97□□□□□ -1.93
LHX1P48742 AC009090.3-201ENST00000616553 565 ntBASIC2.97□□□□□ -1.93
LHX1P48742 AC233263.6-201ENST00000631132 1963 ntBASIC2.97□□□□□ -1.93
LHX1P48742 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.97□□□□□ -1.93
LHX1P48742 MTND5P7-201ENST00000413558 1798 ntBASIC2.97□□□□□ -1.93
LHX1P48742 RNU6-1167P-201ENST00000363227 94 ntBASIC2.96□□□□□ -1.94
LHX1P48742 RNU6-270P-201ENST00000364131 105 ntBASIC2.96□□□□□ -1.94
LHX1P48742 Y_RNA.245-201ENST00000364493 95 ntBASIC2.96□□□□□ -1.94
LHX1P48742 SNORA14A-201ENST00000364773 135 ntBASIC2.96□□□□□ -1.94
LHX1P48742 SMIM11P1-201ENST00000369586 178 ntBASIC2.96□□□□□ -1.94
LHX1P48742 RNU6-217P-201ENST00000384164 104 ntBASIC2.96□□□□□ -1.94
LHX1P48742 Y_RNA.510-201ENST00000384511 114 ntBASIC2.96□□□□□ -1.94
LHX1P48742 RNU6-140P-201ENST00000384566 108 ntBASIC2.96□□□□□ -1.94
LHX1P48742 MIR9-1-201ENST00000385198 89 ntBASIC2.96□□□□□ -1.94
LHX1P48742 AL138827.1-201ENST00000402666 306 ntBASIC2.96□□□□□ -1.94
LHX1P48742 MRPL50P2-201ENST00000416821 482 ntBASIC2.96□□□□□ -1.94
LHX1P48742 C1DP2-201ENST00000418167 426 ntBASIC2.96□□□□□ -1.94
LHX1P48742 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.96□□□□□ -1.94
LHX1P48742 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.96□□□□□ -1.94
LHX1P48742 AC093106.2-201ENST00000428212 385 ntBASIC2.96□□□□□ -1.94
LHX1P48742 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.96□□□□□ -1.94
LHX1P48742 HMGB3P12-201ENST00000438745 556 ntBASIC2.96□□□□□ -1.94
LHX1P48742 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.96□□□□□ -1.94
LHX1P48742 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.96□□□□□ -1.94
LHX1P48742 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.96□□□□□ -1.94
LHX1P48742 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.96□□□□□ -1.94
LHX1P48742 snoU13.28-201ENST00000459235 104 ntBASIC2.96□□□□□ -1.94
LHX1P48742 MTND4LP3-201ENST00000468320 276 ntBASIC2.96□□□□□ -1.94
LHX1P48742 AP004217.1-201ENST00000480579 346 ntBASIC2.96□□□□□ -1.94
LHX1P48742 RN7SL283P-201ENST00000489055 303 ntBASIC2.96□□□□□ -1.94
LHX1P48742 AC022447.1-201ENST00000515358 464 ntBASIC2.96□□□□□ -1.94
LHX1P48742 RNA5SP356-201ENST00000515972 94 ntBASIC2.96□□□□□ -1.94
LHX1P48742 RN7SKP132-201ENST00000516001 208 ntBASIC2.96□□□□□ -1.94
LHX1P48742 AC022616.3-201ENST00000523940 148 ntBASIC2.96□□□□□ -1.94
LHX1P48742 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.96□□□□□ -1.94
LHX1P48742 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.96□□□□□ -1.94
LHX1P48742 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.96□□□□□ -1.94
LHX1P48742 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.96□□□□□ -1.94
LHX1P48742 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.96□□□□□ -1.94
LHX1P48742 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.96□□□□□ -1.94
LHX1P48742 ZNF861P-201ENST00000588126 639 ntBASIC2.96□□□□□ -1.94
LHX1P48742 AC007363.1-201ENST00000604736 620 ntBASIC2.96□□□□□ -1.94
LHX1P48742 AC080013.6-201ENST00000606185 215 ntBASIC2.96□□□□□ -1.94
LHX1P48742 AP002360.4-201ENST00000606980 481 ntBASIC2.96□□□□□ -1.94
LHX1P48742 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LHX1P48742 AL020991.1-201ENST00000612314 373 ntBASIC2.96□□□□□ -1.94
LHX1P48742 AC048344.4-201ENST00000619744 527 ntBASIC2.96□□□□□ -1.94
LHX1P48742 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.96□□□□□ -1.94
LHX1P48742 AC110774.1-201ENST00000623567 2018 ntBASIC2.96□□□□□ -1.94
LHX1P48742 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.96□□□□□ -1.94
LHX1P48742 AL137003.2-201ENST00000606924 2538 ntBASIC2.96□□□□□ -1.94
LHX1P48742 CR848007.1-201ENST00000442354 1699 ntBASIC2.95□□□□□ -1.94
LHX1P48742 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.95□□□□□ -1.94
LHX1P48742 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.95□□□□□ -1.94
LHX1P48742 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
LHX1P48742 GABRG2-229ENST00000641017 3628 ntBASIC2.95□□□□□ -1.94
LHX1P48742 AL355596.1-201ENST00000565399 3996 ntBASIC2.95□□□□□ -1.94
LHX1P48742 UBE2L2-201ENST00000254302 429 ntBASIC2.95□□□□□ -1.94
LHX1P48742 Y_RNA.51-201ENST00000362725 102 ntBASIC2.95□□□□□ -1.94
LHX1P48742 RNU6-960P-201ENST00000364056 120 ntBASIC2.95□□□□□ -1.94
LHX1P48742 SNORA75-201ENST00000384158 137 ntBASIC2.95□□□□□ -1.94
LHX1P48742 RNU6-39P-201ENST00000384344 107 ntBASIC2.95□□□□□ -1.94
LHX1P48742 RNU6-348P-201ENST00000384386 107 ntBASIC2.95□□□□□ -1.94
LHX1P48742 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LHX1P48742 AL139397.2-201ENST00000404529 772 ntBASIC2.95□□□□□ -1.94
LHX1P48742 RN7SKP123-201ENST00000410732 291 ntBASIC2.95□□□□□ -1.94
LHX1P48742 RNA5SP21-201ENST00000410917 96 ntBASIC2.95□□□□□ -1.94
LHX1P48742 AL451074.5-201ENST00000415894 435 ntBASIC2.95□□□□□ -1.94
LHX1P48742 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LHX1P48742 SDCBPP3-201ENST00000419629 891 ntBASIC2.95□□□□□ -1.94
LHX1P48742 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX1P48742 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX1P48742 RPS24P1-201ENST00000438550 371 ntBASIC2.95□□□□□ -1.94
LHX1P48742 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX1P48742 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.95□□□□□ -1.94
LHX1P48742 AL031667.1-201ENST00000440222 725 ntBASIC2.95□□□□□ -1.94
LHX1P48742 DDX3P2-201ENST00000446138 111 ntBASIC2.95□□□□□ -1.94
LHX1P48742 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.95□□□□□ -1.94
LHX1P48742 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX1P48742 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX1P48742 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX1P48742 RNA5SP471-201ENST00000516971 106 ntBASIC2.95□□□□□ -1.94
LHX1P48742 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.95□□□□□ -1.94
LHX1P48742 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms