Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC103988.1-201ENST00000566382 2177 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXD12P35452 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HOXD12P35452 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HOXD12P35452 AC233263.6-201ENST00000631132 1963 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXD12P35452 RNU6-188P-201ENST00000364207 107 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 RNU6-996P-201ENST00000365438 107 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXD12P35452 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 RNU6-1068P-201ENST00000410958 103 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 OR9R1P-201ENST00000412200 877 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 NDUFB4P7-201ENST00000423198 363 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 RPL21P40-201ENST00000428586 483 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 CALM1P1-201ENST00000442082 433 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 AC009237.8-201ENST00000445492 379 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 AL671855.1-201ENST00000446875 1203 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 MTND5P20-201ENST00000448677 143 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXD12P35452 AP002884.2-201ENST00000471647 395 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXD12P35452 AC098799.2-201ENST00000509466 868 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXD12P35452 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXD12P35452 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXD12P35452 AC005730.3-201ENST00000583067 366 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 DISC2.1-201ENST00000612827 205 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 AC004696.1-201ENST00000614345 607 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXD12P35452 AC110801.1-201ENST00000623590 212 ntBASIC3.66□□□□□ -1.82
HOXD12P35452 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXD12P35452 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXD12P35452 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXD12P35452 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXD12P35452 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HOXD12P35452 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HOXD12P35452 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.65□□□□□ -1.82
HOXD12P35452 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HOXD12P35452 SNORD9-201ENST00000362566 104 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 RNU6-451P-201ENST00000362921 107 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 SNORA62.1-201ENST00000364287 154 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 Y_RNA.255-201ENST00000364581 97 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 AL359634.1-202ENST00000404721 284 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 TXNP7-201ENST00000406296 293 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 AC114491.1-201ENST00000416095 246 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 AC017079.2-201ENST00000416102 485 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXD12P35452 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXD12P35452 RAC1P6-201ENST00000423911 575 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 AC008850.1-201ENST00000427546 362 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 AC093106.2-201ENST00000428212 385 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 AC092573.2-201ENST00000434546 243 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXD12P35452 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXD12P35452 BX510359.1-201ENST00000456973 237 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXD12P35452 RPS29P15-201ENST00000458329 171 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 AL163973.1-201ENST00000484753 577 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXD12P35452 AC018710.1-201ENST00000506509 158 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 PCBP2P3-201ENST00000509726 843 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 AC006445.2-201ENST00000510061 472 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 AC010265.1-201ENST00000513509 211 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 AC105417.1-201ENST00000514691 285 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 SNORA20.3-201ENST00000516880 132 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 RNU6-1092P-201ENST00000516955 87 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 RNU6-840P-201ENST00000517275 65 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 OR5BN1P-201ENST00000532955 829 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXD12P35452 AC007458.1-201ENST00000542812 373 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXD12P35452 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXD12P35452 AL121576.1-201ENST00000556055 276 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 MIR4425-201ENST00000580572 84 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 MIR3609-201ENST00000582661 80 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXD12P35452 AC006116.10-201ENST00000591836 581 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 AC005858.4-201ENST00000623191 700 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 AP003122.6-201ENST00000623831 495 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXD12P35452 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXD12P35452 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXD12P35452 MAPK10-373ENST00000641983 6772 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 AC007496.3-201ENST00000624987 3443 ntBASIC3.65□□□□□ -1.83
HOXD12P35452 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXD12P35452 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXD12P35452 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXD12P35452 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXD12P35452 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
HOXD12P35452 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXD12P35452 MTND5P17-201ENST00000418405 1603 ntBASIC3.64□□□□□ -1.83
HOXD12P35452 NACAP2-201ENST00000318548 624 ntBASIC3.64□□□□□ -1.83
HOXD12P35452 Y_RNA.160-201ENST00000363677 92 ntBASIC3.64□□□□□ -1.83
HOXD12P35452 RNU6-960P-201ENST00000364056 120 ntBASIC3.64□□□□□ -1.83
HOXD12P35452 SNORA14A-201ENST00000364773 135 ntBASIC3.64□□□□□ -1.83
HOXD12P35452 AC110754.1-201ENST00000399740 601 ntBASIC3.64□□□□□ -1.83
HOXD12P35452 RNA5SP120-201ENST00000410900 112 ntBASIC3.64□□□□□ -1.83
HOXD12P35452 MTCYBP8-201ENST00000422855 651 ntBASIC3.64□□□□□ -1.83
HOXD12P35452 ATP5JP1-201ENST00000431631 322 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms