Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SNORD6-201ENST00000365444 73 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 MIR129-1-201ENST00000384972 72 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 RNU2-37P-201ENST00000410695 177 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 RAC1P3-201ENST00000416129 580 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXC12P31275 AL158071.1-201ENST00000430315 461 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 AC011816.1-201ENST00000441346 546 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 IPO7P1-201ENST00000442031 636 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 HMGN2P7-201ENST00000456186 273 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 RNU6-1037P-201ENST00000459571 107 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 MTATP8P1-201ENST00000467115 207 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
HOXC12P31275 RPL21P13-201ENST00000488305 481 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 DEFB109F-201ENST00000491870 277 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXC12P31275 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC12P31275 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXC12P31275 ACA59.1-201ENST00000515966 143 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXC12P31275 TRAV32-201ENST00000553993 340 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXC12P31275 AC008269.2-201ENST00000561915 1105 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 MIR3976-201ENST00000606807 139 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 AC012531.5-201ENST00000611375 151 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXC12P31275 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXC12P31275 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC12P31275 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HOXC12P31275 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HOXC12P31275 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC12P31275 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC12P31275 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXC12P31275 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXC12P31275 AC100778.3-201ENST00000580060 1750 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC12P31275 AC011266.1-201ENST00000624119 3569 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC12P31275 Y_RNA.48-201ENST00000362710 103 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 RNA5SP513-201ENST00000364648 118 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 MIR10A-201ENST00000385043 110 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 RNU1-82P-201ENST00000390851 165 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 SNORA57.1-201ENST00000391227 145 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 AL022722.2-201ENST00000402519 180 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 RNU2-68P-201ENST00000410878 191 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC12P31275 AC007560.1-201ENST00000426912 237 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 AL627311.1-201ENST00000431514 115 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 VDAC1P3-201ENST00000434069 851 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 DAP3P1-201ENST00000441522 278 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 ARL2BPP10-201ENST00000446487 531 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXC12P31275 NDUFB1P2-201ENST00000449477 176 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC12P31275 AC091868.1-201ENST00000508746 304 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC12P31275 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC12P31275 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC12P31275 COX6CP5-201ENST00000527162 228 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC12P31275 HMGB1P14-201ENST00000557424 591 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 TRAV28-201ENST00000557548 323 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 MIR5699-201ENST00000578903 90 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXC12P31275 AL121655.1-201ENST00000605811 308 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 MIR6716-201ENST00000613413 80 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 AL022401.1-201ENST00000619498 108 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXC12P31275 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC12P31275 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXC12P31275 AC068254.2-201ENST00000623938 3577 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXC12P31275 USP8P1-201ENST00000494673 3183 ntBASIC4.17□□□□□ -1.74
HOXC12P31275 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC12P31275 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
HOXC12P31275 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC12P31275 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC12P31275 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC12P31275 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC12P31275 AL133383.2-201ENST00000622958 2336 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXC12P31275 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HOXC12P31275 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXC12P31275 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HOXC12P31275 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC12P31275 RPL9P7-201ENST00000330965 580 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 SNORD113.2-201ENST00000364166 89 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 SNORD14B-201ENST00000364533 90 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 RNU6-596P-201ENST00000365395 98 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 MIR607-201ENST00000385241 96 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HOXC12P31275 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HOXC12P31275 SNORA48.7-201ENST00000391302 135 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXC12P31275 RNU6-174P-201ENST00000410406 106 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 SNORD56-201ENST00000413522 71 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 AL513043.1-201ENST00000439124 535 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXC12P31275 RPL9P9-202ENST00000466501 579 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 AC128713.1-201ENST00000471495 306 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 SNORA31.19-201ENST00000517079 126 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms