Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TIMM9P3-201ENST00000428659 274 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 MTND3P21-201ENST00000433774 331 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 AL596276.1-201ENST00000434465 418 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 RPS15AP9-201ENST00000439856 381 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 AC098831.1-201ENST00000440661 216 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 RPL23AP20-201ENST00000447965 421 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.22□□□□□ -1.89
ABCD3P28288 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.22□□□□□ -1.89
ABCD3P28288 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.22□□□□□ -1.89
ABCD3P28288 RPL9P6-201ENST00000492764 598 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 AC117522.3-201ENST00000507974 584 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.22□□□□□ -1.89
ABCD3P28288 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.22□□□□□ -1.89
ABCD3P28288 AC010265.1-201ENST00000513509 211 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.22□□□□□ -1.89
ABCD3P28288 RNU6-720P-201ENST00000516363 108 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.22□□□□□ -1.89
ABCD3P28288 AC026333.2-201ENST00000542164 106 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.22□□□□□ -1.89
ABCD3P28288 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ABCD3P28288 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.22□□□□□ -1.89
ABCD3P28288 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.22□□□□□ -1.89
ABCD3P28288 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.22□□□□□ -1.89
ABCD3P28288 AL133393.1-201ENST00000603277 287 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 AL670379.4-201ENST00000605279 254 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 AC008945.2-201ENST00000606056 604 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 AC017083.3-201ENST00000609955 700 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 SNORD39.4-201ENST00000620099 78 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 AL357559.1-201ENST00000622228 274 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 AC124864.2-201ENST00000624736 186 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.22□□□□□ -1.89
ABCD3P28288 AC093908.1-201ENST00000623125 8092 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ABCD3P28288 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ABCD3P28288 AC099654.7-201ENST00000635788 2127 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
ABCD3P28288 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
ABCD3P28288 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
ABCD3P28288 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
ABCD3P28288 ELF2P3-201ENST00000445099 1506 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 RNA5SP119-201ENST00000362715 117 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 MIR767-201ENST00000390228 109 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 RNA5SP354-201ENST00000391247 136 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
ABCD3P28288 RNU6-1025P-201ENST00000410629 104 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 RNU4-46P-201ENST00000410818 138 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.21□□□□□ -1.9
ABCD3P28288 OR6C66P-201ENST00000414917 930 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 AC017079.2-201ENST00000416102 485 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 AC068533.1-201ENST00000418542 415 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.21□□□□□ -1.9
ABCD3P28288 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.21□□□□□ -1.9
ABCD3P28288 MTND1P34-201ENST00000438556 671 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 AC104058.1-201ENST00000448028 297 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 MTND1P18-201ENST00000448191 573 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 PSPHP1-201ENST00000450062 261 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.21□□□□□ -1.9
ABCD3P28288 AC139453.3-201ENST00000493276 369 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.21□□□□□ -1.9
ABCD3P28288 AC009901.1-201ENST00000506703 541 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 PHBP14-201ENST00000512887 367 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 AC009902.1-201ENST00000519351 183 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
ABCD3P28288 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.21□□□□□ -1.9
ABCD3P28288 EIF1P4-201ENST00000572664 335 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 MIR4738-201ENST00000579134 87 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 MIR548AC-201ENST00000585049 88 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.21□□□□□ -1.9
ABCD3P28288 AC008739.3-201ENST00000603262 127 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 AC007938.3-201ENST00000604965 623 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 AC126118.1-201ENST00000607744 628 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.21□□□□□ -1.9
ABCD3P28288 MIR6863-201ENST00000636112 90 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 AC099654.12-201ENST00000639868 649 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
ABCD3P28288 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.21□□□□□ -1.9
ABCD3P28288 MFSD8-233ENST00000641482 4860 ntBASIC3.21□□□□□ -1.9
ABCD3P28288 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ABCD3P28288 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
ABCD3P28288 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.21□□□□□ -1.9
ABCD3P28288 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.2□□□□□ -1.9
ABCD3P28288 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ABCD3P28288 RNU4-35P-201ENST00000362588 141 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 RNU6-1029P-201ENST00000384109 107 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 Y_RNA.481-201ENST00000384373 102 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 RNU6-658P-201ENST00000384606 106 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.2□□□□□ -1.9
ABCD3P28288 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.2□□□□□ -1.9
ABCD3P28288 RPS15AP5-201ENST00000436276 388 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 AC006539.3-201ENST00000454258 129 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 RPS29P15-201ENST00000458329 171 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 RNU7-63P-201ENST00000459054 62 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 AC006512.1-201ENST00000468816 291 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 AC025518.1-201ENST00000479856 347 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 RPS3AP14-201ENST00000483907 780 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 RPS29P20-201ENST00000489592 171 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 AC082651.2-201ENST00000496833 166 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms