Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 MIR3199-1-201ENST00000582434 88 ntBASIC1.72□□□□□ -2.13
CTLA4P16410 MIR3935-201ENST00000583472 104 ntBASIC1.72□□□□□ -2.13
CTLA4P16410 AC002545.1-201ENST00000592511 181 ntBASIC1.72□□□□□ -2.13
CTLA4P16410 AC008121.1-201ENST00000603244 268 ntBASIC1.72□□□□□ -2.13
CTLA4P16410 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.72□□□□□ -2.13
CTLA4P16410 PART1_2.1-201ENST00000612397 250 ntBASIC1.72□□□□□ -2.13
CTLA4P16410 SDR42E1P2-201ENST00000614861 481 ntBASIC1.72□□□□□ -2.13
CTLA4P16410 AL136981.2-201ENST00000617319 734 ntBASIC1.72□□□□□ -2.13
CTLA4P16410 DUXAP9-208ENST00000622815 614 ntBASIC1.72□□□□□ -2.13
CTLA4P16410 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.71□□□□□ -2.14
CTLA4P16410 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
CTLA4P16410 RNU6-884P-201ENST00000363889 107 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 RNU6-744P-201ENST00000365557 107 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
CTLA4P16410 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CTLA4P16410 RNU6-1316P-201ENST00000384242 108 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 SNORD116-12-201ENST00000384468 92 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CTLA4P16410 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 RNU2-20P-201ENST00000410425 191 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 MTCYBP38-201ENST00000417160 1123 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.71□□□□□ -2.14
CTLA4P16410 NANOGP2-201ENST00000435391 727 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.71□□□□□ -2.14
CTLA4P16410 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.71□□□□□ -2.14
CTLA4P16410 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.71□□□□□ -2.14
CTLA4P16410 USP9YP10-201ENST00000454868 628 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.71□□□□□ -2.14
CTLA4P16410 RPL12P25-201ENST00000455592 494 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 MEMO1P3-201ENST00000459811 302 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 AC072039.1-201ENST00000477611 581 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 AC104982.1-201ENST00000478775 574 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 RPS27P21-201ENST00000486977 252 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 AL160314.1-201ENST00000490836 438 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.71□□□□□ -2.14
CTLA4P16410 AC079395.1-201ENST00000510981 262 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 SCARNA3-201ENST00000517097 143 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 AC091163.3-201ENST00000518269 1144 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.71□□□□□ -2.14
CTLA4P16410 AC025755.1-201ENST00000521306 278 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.71□□□□□ -2.14
CTLA4P16410 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.71□□□□□ -2.14
CTLA4P16410 AP000403.1-201ENST00000603349 851 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 AC090186.1-201ENST00000605991 572 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 AC109809.1-201ENST00000619665 545 ntBASIC1.71□□□□□ -2.14
CTLA4P16410 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.71□□□□□ -2.14
CTLA4P16410 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CTLA4P16410 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.71□□□□□ -2.14
CTLA4P16410 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
CTLA4P16410 RNU6-432P-201ENST00000384196 109 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 U3.40-201ENST00000408706 208 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 RN7SKP192-201ENST00000411291 327 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 EIF1AXP1-201ENST00000419267 435 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.7□□□□□ -2.14
CTLA4P16410 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.7□□□□□ -2.14
CTLA4P16410 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.7□□□□□ -2.14
CTLA4P16410 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.7□□□□□ -2.14
CTLA4P16410 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.7□□□□□ -2.14
CTLA4P16410 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.7□□□□□ -2.14
CTLA4P16410 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.7□□□□□ -2.14
CTLA4P16410 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.7□□□□□ -2.14
CTLA4P16410 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.7□□□□□ -2.14
CTLA4P16410 MTND1P16-201ENST00000465177 898 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 AL121769.1-201ENST00000469473 401 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 HMGB1P36-201ENST00000487709 576 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 AC079804.2-201ENST00000490376 200 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.7□□□□□ -2.14
CTLA4P16410 AC096571.1-202ENST00000506634 735 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 AC109445.1-201ENST00000512356 383 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.7□□□□□ -2.14
CTLA4P16410 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.7□□□□□ -2.14
CTLA4P16410 SNORA31.6-201ENST00000516241 130 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 RNA5SP364-201ENST00000516938 78 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.7□□□□□ -2.14
CTLA4P16410 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.7□□□□□ -2.14
CTLA4P16410 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.7□□□□□ -2.14
CTLA4P16410 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.7□□□□□ -2.14
CTLA4P16410 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.7□□□□□ -2.14
CTLA4P16410 BNIP3P31-201ENST00000604515 566 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 AC007349.4-201ENST00000608114 532 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.7□□□□□ -2.14
CTLA4P16410 AL161423.1-201ENST00000613700 262 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 AL031601.2-202ENST00000622650 282 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.7□□□□□ -2.14
CTLA4P16410 AC244517.12-201ENST00000623581 663 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.7□□□□□ -2.14
CTLA4P16410 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.7□□□□□ -2.14
CTLA4P16410 AC013437.2-201ENST00000639587 677 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 AC099063.3-201ENST00000642066 185 ntBASIC1.7□□□□□ -2.14
CTLA4P16410 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
CTLA4P16410 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.7□□□□□ -2.14
CTLA4P16410 AC010889.1-201ENST00000566193 2666 ntBASIC1.69□□□□□ -2.14
CTLA4P16410 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CTLA4P16410 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CTLA4P16410 AC104454.1-201ENST00000421341 1401 ntBASIC1.69□□□□□ -2.14
CTLA4P16410 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CTLA4P16410 RNU5E-10P-201ENST00000363506 118 ntBASIC1.69□□□□□ -2.14
CTLA4P16410 RNA5SP125-201ENST00000364843 120 ntBASIC1.69□□□□□ -2.14
CTLA4P16410 MIR17-201ENST00000385012 84 ntBASIC1.69□□□□□ -2.14
CTLA4P16410 ERHP2-201ENST00000402323 299 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms