Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXD8P13378 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXD8P13378 SNORA31.6-201ENST00000516241 130 ntBASIC4.93□□□□□ -1.62
HOXD8P13378 RNU4-71P-201ENST00000516258 113 ntBASIC4.93□□□□□ -1.62
HOXD8P13378 RNU6-1315P-201ENST00000517187 99 ntBASIC4.93□□□□□ -1.62
HOXD8P13378 AC022868.1-201ENST00000517767 391 ntBASIC4.93□□□□□ -1.62
HOXD8P13378 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXD8P13378 AC093023.1-201ENST00000547375 507 ntBASIC4.93□□□□□ -1.62
HOXD8P13378 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXD8P13378 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD8P13378 AC006557.5-201ENST00000603126 811 ntBASIC4.93□□□□□ -1.62
HOXD8P13378 AC008962.1-201ENST00000605729 304 ntBASIC4.93□□□□□ -1.62
HOXD8P13378 RNU6-6P-201ENST00000606623 107 ntBASIC4.93□□□□□ -1.62
HOXD8P13378 AC107294.1-201ENST00000609524 467 ntBASIC4.93□□□□□ -1.62
HOXD8P13378 AC023043.4-201ENST00000612081 449 ntBASIC4.93□□□□□ -1.62
HOXD8P13378 AC004792.1-201ENST00000614523 137 ntBASIC4.93□□□□□ -1.62
HOXD8P13378 AC034102.8-201ENST00000615146 484 ntBASIC4.93□□□□□ -1.62
HOXD8P13378 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD8P13378 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXD8P13378 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXD8P13378 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXD8P13378 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD8P13378 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HOXD8P13378 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD8P13378 HSPA8P1-201ENST00000425843 1833 ntBASIC4.93□□□□□ -1.62
HOXD8P13378 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXD8P13378 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXD8P13378 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD8P13378 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXD8P13378 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HOXD8P13378 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD8P13378 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD8P13378 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HOXD8P13378 RNU6-595P-201ENST00000363944 107 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 Y_RNA.274-201ENST00000364714 101 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 Y_RNA.352-201ENST00000365439 102 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 RNA5SP151-201ENST00000365632 117 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 RNU6-395P-201ENST00000365662 106 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD8P13378 Y_RNA.539-201ENST00000384635 107 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXD8P13378 SDAD1P3-201ENST00000427380 333 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 AC091286.1-201ENST00000431233 461 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 AC087650.1-201ENST00000431445 468 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXD8P13378 OR4C10P-201ENST00000434991 931 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXD8P13378 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXD8P13378 NDUFB4P10-201ENST00000452541 359 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 SUMO2P6-201ENST00000505273 288 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 HMGB3P16-201ENST00000508037 287 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 RNA5SP446-201ENST00000515955 82 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 RNU1-86P-201ENST00000516108 154 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 RNU5B-3P-201ENST00000516601 115 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 RNU1-107P-201ENST00000516617 154 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 SNORA31.22-201ENST00000517204 135 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXD8P13378 AL157871.3-201ENST00000557231 293 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD8P13378 MIR376A1-201ENST00000616574 68 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 ZYXP1-201ENST00000617638 118 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD8P13378 MIR8059-201ENST00000620427 81 ntBASIC4.92□□□□□ -1.62
HOXD8P13378 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD8P13378 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD8P13378 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXD8P13378 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HOXD8P13378 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD8P13378 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD8P13378 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HOXD8P13378 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXD8P13378 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD8P13378 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
HOXD8P13378 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXD8P13378 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXD8P13378 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXD8P13378 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXD8P13378 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
HOXD8P13378 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXD8P13378 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXD8P13378 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXD8P13378 MIR383-201ENST00000362257 73 ntBASIC4.91□□□□□ -1.62
HOXD8P13378 Y_RNA.27-201ENST00000362540 103 ntBASIC4.91□□□□□ -1.62
HOXD8P13378 Y_RNA.33-201ENST00000362591 102 ntBASIC4.91□□□□□ -1.62
HOXD8P13378 U3.13-201ENST00000364804 214 ntBASIC4.91□□□□□ -1.62
HOXD8P13378 RNU1-13P-201ENST00000384499 162 ntBASIC4.91□□□□□ -1.62
HOXD8P13378 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HOXD8P13378 AL603910.2-201ENST00000407268 136 ntBASIC4.91□□□□□ -1.62
HOXD8P13378 RNA5SP494-201ENST00000410653 129 ntBASIC4.91□□□□□ -1.62
HOXD8P13378 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXD8P13378 PIGFP3-201ENST00000441918 722 ntBASIC4.91□□□□□ -1.62
HOXD8P13378 AL392103.1-201ENST00000447000 198 ntBASIC4.91□□□□□ -1.62
HOXD8P13378 RNU7-87P-201ENST00000459343 62 ntBASIC4.91□□□□□ -1.62
HOXD8P13378 HMGN1P11-201ENST00000508668 303 ntBASIC4.91□□□□□ -1.62
HOXD8P13378 APOOP4-201ENST00000513530 597 ntBASIC4.91□□□□□ -1.62
HOXD8P13378 RNA5SP497-201ENST00000516081 97 ntBASIC4.91□□□□□ -1.62
HOXD8P13378 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXD8P13378 HNRNPCP4-201ENST00000571636 900 ntBASIC4.91□□□□□ -1.62
HOXD8P13378 MIR5701-3-201ENST00000578890 82 ntBASIC4.91□□□□□ -1.62
HOXD8P13378 RN7SL176P-201ENST00000580352 264 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms