Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC112220.2-201ENST00000605513 533 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AC004067.1-201ENST00000608733 700 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AC093838.1-201ENST00000613014 469 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AC084824.4-201ENST00000620106 731 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AC002550.2-201ENST00000621246 394 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AL159972.1-201ENST00000625150 448 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.58□□□□□ -2.16
COL4A2P08572 MIR4275-201ENST00000636486 87 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL4A2P08572 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
COL4A2P08572 RNU5A-1-201ENST00000362698 116 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 RNU1-42P-201ENST00000364033 160 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 SNORD116-12-201ENST00000384468 92 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 MIR144-201ENST00000384886 86 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 RNU6-1000P-201ENST00000391066 106 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 RPS3AP24-201ENST00000407896 734 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.57□□□□□ -2.16
COL4A2P08572 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.57□□□□□ -2.16
COL4A2P08572 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.57□□□□□ -2.16
COL4A2P08572 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.57□□□□□ -2.16
COL4A2P08572 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.57□□□□□ -2.16
COL4A2P08572 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.57□□□□□ -2.16
COL4A2P08572 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL4A2P08572 SNORD121B-201ENST00000458838 81 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 RPS20P20-201ENST00000460498 340 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 RPS15AP17-201ENST00000470598 390 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL4A2P08572 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
COL4A2P08572 AC147055.4-201ENST00000504399 745 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 AC112198.4-201ENST00000515450 351 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 RNU6-798P-201ENST00000516912 103 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 OR5AQ1P-201ENST00000527596 927 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 AC118942.1-201ENST00000529674 1035 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 NBEAP1-201ENST00000554452 979 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 AL512347.1-201ENST00000566420 503 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 MIR3618-201ENST00000580330 88 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 AC069545.1-201ENST00000605671 358 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 AL357080.1-201ENST00000617394 239 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 AC123767.1-202ENST00000620407 817 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL4A2P08572 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL4A2P08572 Y_RNA.224-201ENST00000364308 111 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
COL4A2P08572 RNU6-952P-201ENST00000391164 108 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.57□□□□□ -2.16
COL4A2P08572 MTND1P21-201ENST00000412991 285 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 USP9YP13-201ENST00000417797 480 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.57□□□□□ -2.16
COL4A2P08572 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
COL4A2P08572 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.57□□□□□ -2.16
COL4A2P08572 AP000949.1-201ENST00000438328 629 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 AC097493.1-201ENST00000463958 372 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 AC009901.1-201ENST00000506703 541 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 OR5BM1P-201ENST00000512021 366 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 RNU6-1225P-201ENST00000516336 65 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 SNORA31.22-201ENST00000517204 135 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.57□□□□□ -2.16
COL4A2P08572 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.57□□□□□ -2.16
COL4A2P08572 SLC2A13P1-201ENST00000531560 322 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.57□□□□□ -2.16
COL4A2P08572 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 AL596245.1-201ENST00000618994 362 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 AL158163.2-201ENST00000619110 700 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 MIR6130-201ENST00000619419 109 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 AC116618.1-201ENST00000634617 774 ntBASIC1.57□□□□□ -2.16
COL4A2P08572 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL4A2P08572 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.56□□□□□ -2.16
COL4A2P08572 RNU1-105P-201ENST00000363470 161 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 RNU6-754P-201ENST00000391166 107 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 C1DP1-201ENST00000426049 402 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.56□□□□□ -2.16
COL4A2P08572 NANOGP2-201ENST00000435391 727 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 Z96811.1-201ENST00000445880 108 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.56□□□□□ -2.16
COL4A2P08572 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.56□□□□□ -2.16
COL4A2P08572 MTND2P24-201ENST00000453434 806 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 snoU109.3-201ENST00000459477 145 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
COL4A2P08572 HMGB1P28-201ENST00000507778 552 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.56□□□□□ -2.16
COL4A2P08572 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.56□□□□□ -2.16
COL4A2P08572 RNU6-528P-201ENST00000516926 100 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 RN7SKP40-201ENST00000517211 242 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.56□□□□□ -2.16
COL4A2P08572 MTND3P13-201ENST00000574391 343 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 MIR3609-201ENST00000582661 80 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 AL390208.1-201ENST00000605885 644 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 AP000254.1-201ENST00000609934 520 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 AL158801.5-201ENST00000623123 465 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 AC104985.3-201ENST00000623479 597 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 AL138960.2-201ENST00000625145 535 ntBASIC1.56□□□□□ -2.16
COL4A2P08572 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
COL4A2P08572 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
COL4A2P08572 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.55□□□□□ -2.16
COL4A2P08572 RNU6-198P-201ENST00000384258 104 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 MIR325-201ENST00000385260 98 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 AL356421.1-201ENST00000403255 413 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms