Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
PDGFAP04085 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFAP04085 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFAP04085 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.7□□□□□ -1.66
PDGFAP04085 AL391987.6-201ENST00000305671 199 ntBASIC4.7□□□□□ -1.66
PDGFAP04085 SNORD27-201ENST00000363981 72 ntBASIC4.7□□□□□ -1.66
PDGFAP04085 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PDGFAP04085 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFAP04085 RNU2-71P-201ENST00000411395 189 ntBASIC4.7□□□□□ -1.66
PDGFAP04085 RPL21P66-201ENST00000426566 466 ntBASIC4.7□□□□□ -1.66
PDGFAP04085 DNAJC19P7-201ENST00000428811 344 ntBASIC4.7□□□□□ -1.66
PDGFAP04085 MTND5P15-201ENST00000434246 349 ntBASIC4.7□□□□□ -1.66
PDGFAP04085 RPL23AP22-201ENST00000437556 453 ntBASIC4.7□□□□□ -1.66
PDGFAP04085 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFAP04085 ISCUP1-201ENST00000454451 448 ntBASIC4.7□□□□□ -1.66
PDGFAP04085 AL132838.2-201ENST00000492041 314 ntBASIC4.7□□□□□ -1.66
PDGFAP04085 RN7SKP40-201ENST00000517211 242 ntBASIC4.7□□□□□ -1.66
PDGFAP04085 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFAP04085 AP002770.2-201ENST00000543613 532 ntBASIC4.7□□□□□ -1.66
PDGFAP04085 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFAP04085 SYF2P1-201ENST00000550658 413 ntBASIC4.7□□□□□ -1.66
PDGFAP04085 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFAP04085 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFAP04085 MIR3667-201ENST00000581025 74 ntBASIC4.7□□□□□ -1.66
PDGFAP04085 AC060766.3-201ENST00000591442 263 ntBASIC4.7□□□□□ -1.66
PDGFAP04085 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFAP04085 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFAP04085 AC118273.1-201ENST00000525324 3006 ntBASIC4.7□□□□□ -1.66
PDGFAP04085 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFAP04085 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFAP04085 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFAP04085 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFAP04085 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
PDGFAP04085 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
PDGFAP04085 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
PDGFAP04085 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.69□□□□□ -1.66
PDGFAP04085 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PDGFAP04085 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFAP04085 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFAP04085 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PDGFAP04085 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
PDGFAP04085 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.69□□□□□ -1.66
PDGFAP04085 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFAP04085 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFAP04085 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
PDGFAP04085 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.69□□□□□ -1.66
PDGFAP04085 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFAP04085 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PDGFAP04085 RNU6-105P-201ENST00000363909 104 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 RNU4-9P-201ENST00000364951 139 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 SNORA66-201ENST00000384792 133 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 U3.37-201ENST00000408528 213 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 RNU4-61P-201ENST00000411243 107 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFAP04085 RPL21P40-201ENST00000428586 483 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFAP04085 AC068287.1-201ENST00000430283 295 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 BX679664.1-201ENST00000434429 253 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 AC073465.2-201ENST00000440938 498 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 TPT1P12-201ENST00000448968 492 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFAP04085 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 Y_RNA.700-201ENST00000516806 100 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 RNU6-182P-201ENST00000516970 105 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.69□□□□□ -1.66
PDGFAP04085 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFAP04085 AC006349.1-201ENST00000555526 235 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFAP04085 AC091042.1-201ENST00000579213 173 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.69□□□□□ -1.66
PDGFAP04085 Y_RNA.772-201ENST00000606692 102 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFAP04085 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFAP04085 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFAP04085 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFAP04085 SDAD1P1-202ENST00000524156 2051 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
PDGFAP04085 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.69□□□□□ -1.66
PDGFAP04085 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PDGFAP04085 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
PDGFAP04085 LINC02555-201ENST00000563933 1951 ntBASIC4.69□□□□□ -1.66
PDGFAP04085 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PDGFAP04085 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFAP04085 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
PDGFAP04085 AC233981.2-201ENST00000611524 1614 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
PDGFAP04085 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.68□□□□□ -1.66
PDGFAP04085 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PDGFAP04085 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDGFAP04085 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDGFAP04085 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDGFAP04085 AC009541.1-201ENST00000438279 2662 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 SNORD81.1-201ENST00000363064 77 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 RNU6-527P-201ENST00000363425 104 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 Y_RNA.237-201ENST00000364439 102 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 RNU6-1062P-201ENST00000383908 107 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 RNU6-140P-201ENST00000384566 108 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PDGFAP04085 SNORD115-46-201ENST00000390982 71 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms