Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AP001804.3-201ENST00000525146 880 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 NDUFS5P6-201ENST00000529136 295 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 SNRPGP16-201ENST00000533275 226 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AC087894.1-201ENST00000538359 518 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.5□□□□□ -2.17
COL4A1P02462 MTCO1P40-201ENST00000574371 625 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 MIR3122-201ENST00000577243 73 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AL606834.3-201ENST00000602615 496 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AC025588.3-201ENST00000604182 274 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 RPL21P136-201ENST00000605378 396 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AC055876.5-201ENST00000605667 259 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
COL4A1P02462 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AP000720.1-201ENST00000625091 483 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AL138960.2-201ENST00000625145 535 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
COL4A1P02462 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
COL4A1P02462 AL354685.2-201ENST00000448218 1447 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 RNU6-468P-201ENST00000384003 109 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 Y_RNA.493-201ENST00000384422 102 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 MTCO1P56-201ENST00000401674 224 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 RNU2-15P-201ENST00000410692 191 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A1P02462 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A1P02462 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A1P02462 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A1P02462 EZH2P1-201ENST00000431167 291 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 MTND4LP16-201ENST00000440828 295 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 RFC5P1-201ENST00000454419 874 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A1P02462 COX7A2P2-201ENST00000505291 250 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A1P02462 RNU6-885P-201ENST00000516607 104 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A1P02462 AP004371.1-201ENST00000525240 214 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 CR383656.7-201ENST00000548164 174 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 BNIP3P24-201ENST00000593398 557 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 AC002487.1-201ENST00000604565 994 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 AC005014.3-201ENST00000605985 190 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 AC024257.5-201ENST00000612739 531 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 AC073968.1-201ENST00000618594 637 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 AC009269.6-201ENST00000621778 588 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 AC006963.1-201ENST00000624003 1052 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 AC091925.2-201ENST00000625059 256 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A1P02462 MKKS-204ENST00000639674 192 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A1P02462 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.49□□□□□ -2.17
COL4A1P02462 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A1P02462 DBF4P1-201ENST00000412976 1892 ntBASIC1.49□□□□□ -2.17
COL4A1P02462 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
COL4A1P02462 RNU6-989P-201ENST00000362756 107 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 RNU6-560P-201ENST00000364007 108 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 RNU6-335P-201ENST00000364563 113 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 SNORD82-201ENST00000365530 70 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 AL023807.1-201ENST00000407932 359 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 AC069282.1-201ENST00000411911 526 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 RPS12P24-201ENST00000412619 387 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 MTND4P3-201ENST00000417829 541 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.48□□□□□ -2.17
COL4A1P02462 PSMA6P3-201ENST00000428242 164 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 SEPT7P5-201ENST00000434048 306 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 NANOGP2-201ENST00000435391 727 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A1P02462 PTGES3P1-201ENST00000439531 483 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 MTND1P18-201ENST00000448191 573 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A1P02462 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.48□□□□□ -2.17
COL4A1P02462 AC010460.2-201ENST00000509054 677 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 SNORA31.20-201ENST00000517111 133 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A1P02462 AL137100.2-201ENST00000555786 315 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A1P02462 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.48□□□□□ -2.17
COL4A1P02462 AC091946.2-201ENST00000606105 291 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 AL592148.2-201ENST00000612210 372 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 AL138478.1-201ENST00000612252 832 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL4A1P02462 ZNF519P1-201ENST00000449011 1626 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL4A1P02462 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
COL4A1P02462 SUGT1P1-201ENST00000379514 476 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
COL4A1P02462 MIR598-201ENST00000384868 97 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 MIR524-201ENST00000385242 87 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 RNU6-298P-201ENST00000390888 96 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 RNU6-821P-201ENST00000390995 107 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 RNU2-28P-201ENST00000410457 189 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 ARF4P4-201ENST00000439608 520 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 SEPT14P24-201ENST00000447236 180 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.48□□□□□ -2.17
COL4A1P02462 AC079776.3-201ENST00000450665 370 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 AL139109.1-201ENST00000455491 297 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 RPS29P1-201ENST00000465274 159 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
COL4A1P02462 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A1P02462 RNU6-1028P-201ENST00000517164 93 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms