Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MIR1290-201ENST00000408735 78 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.47□□□□□ -2.17
COL1A1P02452 EIF4EP4-201ENST00000424916 578 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 MTND2P21-201ENST00000436242 1042 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.47□□□□□ -2.17
COL1A1P02452 OSTCP8-201ENST00000445117 448 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.47□□□□□ -2.17
COL1A1P02452 AC107626.1-201ENST00000471084 183 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.47□□□□□ -2.17
COL1A1P02452 AC147055.4-201ENST00000504399 745 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 AC022447.3-201ENST00000506865 495 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.47□□□□□ -2.17
COL1A1P02452 AC087854.1-201ENST00000519706 414 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 MTCYBP27-201ENST00000555160 670 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.47□□□□□ -2.17
COL1A1P02452 AC109446.2-201ENST00000567872 497 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.47□□□□□ -2.17
COL1A1P02452 AC025165.5-201ENST00000602802 578 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 AC013553.2-201ENST00000604244 589 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 MIR98-201ENST00000606724 119 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 AC097504.2-201ENST00000608088 454 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL1A1P02452 AC073308.1-201ENST00000623696 305 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.47□□□□□ -2.17
COL1A1P02452 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.47□□□□□ -2.17
COL1A1P02452 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
COL1A1P02452 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
COL1A1P02452 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
COL1A1P02452 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
COL1A1P02452 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
COL1A1P02452 SNORA16B-201ENST00000364674 135 ntBASIC1.46□□□□□ -2.18
COL1A1P02452 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.46□□□□□ -2.18
COL1A1P02452 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.46□□□□□ -2.18
COL1A1P02452 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.46□□□□□ -2.18
COL1A1P02452 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.46□□□□□ -2.18
COL1A1P02452 Z80107.1-201ENST00000436830 412 ntBASIC1.46□□□□□ -2.18
COL1A1P02452 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.46□□□□□ -2.18
COL1A1P02452 AL049714.1-201ENST00000466686 347 ntBASIC1.46□□□□□ -2.18
COL1A1P02452 MRPS17P9-201ENST00000511924 393 ntBASIC1.46□□□□□ -2.18
COL1A1P02452 RNU6-798P-201ENST00000516912 103 ntBASIC1.46□□□□□ -2.18
COL1A1P02452 SCARNA11.3-201ENST00000517276 130 ntBASIC1.46□□□□□ -2.18
COL1A1P02452 AC083923.1-201ENST00000523708 376 ntBASIC1.46□□□□□ -2.18
COL1A1P02452 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.46□□□□□ -2.18
COL1A1P02452 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.46□□□□□ -2.18
COL1A1P02452 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.46□□□□□ -2.18
COL1A1P02452 LSM6P2-201ENST00000552208 177 ntBASIC1.46□□□□□ -2.18
COL1A1P02452 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.46□□□□□ -2.18
COL1A1P02452 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.46□□□□□ -2.18
COL1A1P02452 AC022662.1-201ENST00000580252 331 ntBASIC1.46□□□□□ -2.18
COL1A1P02452 AC073592.7-201ENST00000623659 507 ntBASIC1.46□□□□□ -2.18
COL1A1P02452 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
COL1A1P02452 AC010329.5-201ENST00000623497 2174 ntBASIC1.46□□□□□ -2.18
COL1A1P02452 RNU4-91P-201ENST00000364778 135 ntBASIC1.45□□□□□ -2.18
COL1A1P02452 RNU6-1105P-201ENST00000384774 107 ntBASIC1.45□□□□□ -2.18
COL1A1P02452 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.45□□□□□ -2.18
COL1A1P02452 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
COL1A1P02452 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
COL1A1P02452 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.45□□□□□ -2.18
COL1A1P02452 MTCO1P31-201ENST00000506355 492 ntBASIC1.45□□□□□ -2.18
COL1A1P02452 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.45□□□□□ -2.18
COL1A1P02452 AC023141.11-201ENST00000508864 202 ntBASIC1.45□□□□□ -2.18
COL1A1P02452 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.45□□□□□ -2.18
COL1A1P02452 HIGD1AP6-201ENST00000521833 279 ntBASIC1.45□□□□□ -2.18
COL1A1P02452 AC008749.1-201ENST00000597650 306 ntBASIC1.45□□□□□ -2.18
COL1A1P02452 AL031274.2-201ENST00000599419 203 ntBASIC1.45□□□□□ -2.18
COL1A1P02452 AL096840.1-201ENST00000603287 93 ntBASIC1.45□□□□□ -2.18
COL1A1P02452 SDR42E1P2-201ENST00000614861 481 ntBASIC1.45□□□□□ -2.18
COL1A1P02452 AC021755.4-201ENST00000616620 456 ntBASIC1.45□□□□□ -2.18
COL1A1P02452 SDR42E1P4-201ENST00000620894 481 ntBASIC1.45□□□□□ -2.18
COL1A1P02452 AC091932.3-201ENST00000624223 323 ntBASIC1.45□□□□□ -2.18
COL1A1P02452 AC092608.3-201ENST00000625017 386 ntBASIC1.45□□□□□ -2.18
COL1A1P02452 AL390862.1-201ENST00000635467 1469 ntBASIC1.45□□□□□ -2.18
COL1A1P02452 Y_RNA.251-201ENST00000364551 99 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.44□□□□□ -2.18
COL1A1P02452 RNU6-220P-201ENST00000390919 107 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 FCF1P2-201ENST00000415284 583 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.44□□□□□ -2.18
COL1A1P02452 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.44□□□□□ -2.18
COL1A1P02452 GTF2IP20-201ENST00000431663 360 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 AL591704.1-201ENST00000432574 275 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 AL078601.1-201ENST00000444542 271 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 AL360221.1-201ENST00000445989 335 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 AL592447.1-201ENST00000447592 540 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 AC005297.2-201ENST00000450430 606 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.44□□□□□ -2.18
COL1A1P02452 RFC5P1-201ENST00000454419 874 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 RPS29P23-201ENST00000458635 123 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.44□□□□□ -2.18
COL1A1P02452 RNU6-760P-201ENST00000516078 97 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 HAUS1P3-201ENST00000523909 662 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.44□□□□□ -2.18
COL1A1P02452 AC078899.2-201ENST00000595282 212 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 AC040174.2-201ENST00000602701 465 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 AC006338.1-201ENST00000618453 749 ntBASIC1.44□□□□□ -2.18
COL1A1P02452 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.44□□□□□ -2.18
COL1A1P02452 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.44□□□□□ -2.18
COL1A1P02452 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.44□□□□□ -2.18
COL1A1P02452 SNORA27.3-201ENST00000364937 134 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 ZNF90P2-204ENST00000419323 1075 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 AC099548.1-201ENST00000421443 426 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms