Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
PDGFBP01127 MTND5P33-201ENST00000571250 1450 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.82□□□□□ -1.96
PDGFBP01127 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PDGFBP01127 Y_RNA.46-201ENST00000362695 102 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 MIR592-201ENST00000384959 97 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 MIR627-201ENST00000384979 97 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PDGFBP01127 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.81□□□□□ -1.96
PDGFBP01127 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.81□□□□□ -1.96
PDGFBP01127 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.81□□□□□ -1.96
PDGFBP01127 AC009414.1-201ENST00000427200 443 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 AC109583.1-201ENST00000432156 268 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.81□□□□□ -1.96
PDGFBP01127 RPL23AP22-201ENST00000437556 453 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.81□□□□□ -1.96
PDGFBP01127 HMGN1P18-201ENST00000457642 277 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.81□□□□□ -1.96
PDGFBP01127 RPL31P41-201ENST00000477967 372 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 AP000797.1-201ENST00000478870 387 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.81□□□□□ -1.96
PDGFBP01127 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.81□□□□□ -1.96
PDGFBP01127 AC010486.3-201ENST00000511602 785 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.81□□□□□ -1.96
PDGFBP01127 AC091489.2-201ENST00000566263 604 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.81□□□□□ -1.96
PDGFBP01127 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.81□□□□□ -1.96
PDGFBP01127 MIR4506-201ENST00000584693 77 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.81□□□□□ -1.96
PDGFBP01127 FTX_3.1-201ENST00000610451 147 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 AL591516.1-201ENST00000611326 274 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 MIR7844-201ENST00000616161 122 ntBASIC2.81□□□□□ -1.96
PDGFBP01127 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.81□□□□□ -1.96
PDGFBP01127 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PDGFBP01127 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.81□□□□□ -1.96
PDGFBP01127 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PDGFBP01127 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PDGFBP01127 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
PDGFBP01127 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PDGFBP01127 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PDGFBP01127 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 RNU6-1180P-201ENST00000364935 107 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 SNORD116-2-201ENST00000384274 95 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 SNORD116-6-201ENST00000384711 96 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 RNU6-482P-201ENST00000391068 107 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 RNU2-25P-201ENST00000411041 191 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 SDCBPP3-201ENST00000419629 891 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.8□□□□□ -1.96
PDGFBP01127 RPL7P37-201ENST00000425095 738 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 RPL7P12-201ENST00000446719 750 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 RPL26P9-201ENST00000457466 433 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.8□□□□□ -1.96
PDGFBP01127 AC055855.1-201ENST00000489563 579 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 AC091965.2-201ENST00000512324 613 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.8□□□□□ -1.96
PDGFBP01127 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.8□□□□□ -1.96
PDGFBP01127 ZNF519P3-201ENST00000557158 1032 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 AC010546.1-201ENST00000569391 485 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 MIR5697-201ENST00000578045 78 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 AC010620.1-201ENST00000601088 1102 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 AC112187.2-201ENST00000604345 283 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.8□□□□□ -1.96
PDGFBP01127 AC092354.1-201ENST00000606057 376 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 AL355472.4-201ENST00000610233 626 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.8□□□□□ -1.96
PDGFBP01127 MIR7111-201ENST00000619751 72 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 AC025034.2-201ENST00000623264 286 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 AC068057.2-201ENST00000624047 895 ntBASIC2.8□□□□□ -1.96
PDGFBP01127 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PDGFBP01127 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
PDGFBP01127 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
PDGFBP01127 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PDGFBP01127 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PDGFBP01127 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.79□□□□□ -1.96
PDGFBP01127 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.79□□□□□ -1.96
PDGFBP01127 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PDGFBP01127 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.79□□□□□ -1.96
PDGFBP01127 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PDGFBP01127 U3.4-201ENST00000363352 213 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 RNU5E-5P-201ENST00000365379 116 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 RNU6-278P-201ENST00000390945 109 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PDGFBP01127 RPL21P75-201ENST00000396599 483 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
PDGFBP01127 RPL21P28-201ENST00000401418 483 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 AL592114.1-201ENST00000403842 483 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 USP9YP13-201ENST00000417797 480 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 AC090960.1-201ENST00000421072 306 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 AL356583.2-201ENST00000426536 280 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.79□□□□□ -1.96
PDGFBP01127 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.79□□□□□ -1.96
PDGFBP01127 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.79□□□□□ -1.96
PDGFBP01127 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PDGFBP01127 RNU7-59P-201ENST00000459101 61 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 RPL21P39-201ENST00000463605 483 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 AC126182.1-201ENST00000478134 357 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms