Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
DDX58O95786 SNORD116-1-201ENST00000384335 95 ntBASIC3.45□□□□□ -1.86
DDX58O95786 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.45□□□□□ -1.86
DDX58O95786 AL589872.1-201ENST00000426602 288 ntBASIC3.45□□□□□ -1.86
DDX58O95786 NEFMP1-201ENST00000443423 1006 ntBASIC3.45□□□□□ -1.86
DDX58O95786 Z83846.1-201ENST00000446798 265 ntBASIC3.45□□□□□ -1.86
DDX58O95786 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.45□□□□□ -1.86
DDX58O95786 RPL12P25-201ENST00000455592 494 ntBASIC3.45□□□□□ -1.86
DDX58O95786 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.45□□□□□ -1.86
DDX58O95786 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.45□□□□□ -1.86
DDX58O95786 Y_RNA.672-201ENST00000516289 104 ntBASIC3.45□□□□□ -1.86
DDX58O95786 AP003122.4-201ENST00000530980 758 ntBASIC3.45□□□□□ -1.86
DDX58O95786 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.45□□□□□ -1.86
DDX58O95786 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.45□□□□□ -1.86
DDX58O95786 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.45□□□□□ -1.86
DDX58O95786 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.45□□□□□ -1.86
DDX58O95786 AC073544.2-201ENST00000601155 540 ntBASIC3.45□□□□□ -1.86
DDX58O95786 AC136601.2-201ENST00000604356 474 ntBASIC3.45□□□□□ -1.86
DDX58O95786 FTX_3.1-201ENST00000610451 147 ntBASIC3.45□□□□□ -1.86
DDX58O95786 AC025594.3-201ENST00000613068 790 ntBASIC3.45□□□□□ -1.86
DDX58O95786 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.45□□□□□ -1.86
DDX58O95786 AC034102.8-201ENST00000615146 484 ntBASIC3.45□□□□□ -1.86
DDX58O95786 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX58O95786 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX58O95786 RNU4-91P-201ENST00000364778 135 ntBASIC3.44□□□□□ -1.86
DDX58O95786 SNORD116-9-201ENST00000384000 95 ntBASIC3.44□□□□□ -1.86
DDX58O95786 SNORD116-3-201ENST00000384287 95 ntBASIC3.44□□□□□ -1.86
DDX58O95786 SNORD116-7-201ENST00000384404 95 ntBASIC3.44□□□□□ -1.86
DDX58O95786 SNORD116-5-201ENST00000384462 95 ntBASIC3.44□□□□□ -1.86
DDX58O95786 MIR196B-201ENST00000384852 84 ntBASIC3.44□□□□□ -1.86
DDX58O95786 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.44□□□□□ -1.86
DDX58O95786 RNU2-8P-201ENST00000410727 190 ntBASIC3.44□□□□□ -1.86
DDX58O95786 RPS3AP3-201ENST00000411933 242 ntBASIC3.44□□□□□ -1.86
DDX58O95786 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.44□□□□□ -1.86
DDX58O95786 ARL5AP4-201ENST00000430731 512 ntBASIC3.44□□□□□ -1.86
DDX58O95786 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.44□□□□□ -1.86
DDX58O95786 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.44□□□□□ -1.86
DDX58O95786 ST13P20-201ENST00000447996 1065 ntBASIC3.44□□□□□ -1.86
DDX58O95786 RPL7P5-201ENST00000471472 736 ntBASIC3.44□□□□□ -1.86
DDX58O95786 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.44□□□□□ -1.86
DDX58O95786 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.44□□□□□ -1.86
DDX58O95786 RAC1P5-201ENST00000512182 576 ntBASIC3.44□□□□□ -1.86
DDX58O95786 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.44□□□□□ -1.86
DDX58O95786 MIR4298-201ENST00000584380 73 ntBASIC3.44□□□□□ -1.86
DDX58O95786 AC005771.1-201ENST00000585581 349 ntBASIC3.44□□□□□ -1.86
DDX58O95786 AC119751.7-201ENST00000600494 245 ntBASIC3.44□□□□□ -1.86
DDX58O95786 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
DDX58O95786 AL603839.4-201ENST00000624658 1005 ntBASIC3.44□□□□□ -1.86
DDX58O95786 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.44□□□□□ -1.86
DDX58O95786 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX58O95786 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
DDX58O95786 MTND5P19-201ENST00000424872 1794 ntBASIC3.43□□□□□ -1.86
DDX58O95786 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
DDX58O95786 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
DDX58O95786 MTND5P29-201ENST00000458676 1807 ntBASIC3.43□□□□□ -1.86
DDX58O95786 UBE2L2-201ENST00000254302 429 ntBASIC3.43□□□□□ -1.86
DDX58O95786 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
DDX58O95786 Y_RNA.77-201ENST00000362962 107 ntBASIC3.43□□□□□ -1.86
DDX58O95786 MIR34A-201ENST00000385130 110 ntBASIC3.43□□□□□ -1.86
DDX58O95786 MIR767-201ENST00000390228 109 ntBASIC3.43□□□□□ -1.86
DDX58O95786 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
DDX58O95786 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX58O95786 SEPT2P1-201ENST00000419651 180 ntBASIC3.43□□□□□ -1.86
DDX58O95786 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.43□□□□□ -1.86
DDX58O95786 DPPA2P1-201ENST00000428060 556 ntBASIC3.43□□□□□ -1.86
DDX58O95786 GPM6BP2-201ENST00000432046 144 ntBASIC3.43□□□□□ -1.86
DDX58O95786 AC010153.1-201ENST00000432862 727 ntBASIC3.43□□□□□ -1.86
DDX58O95786 AC112220.1-201ENST00000434628 355 ntBASIC3.43□□□□□ -1.86
DDX58O95786 MTCO2P16-201ENST00000436962 677 ntBASIC3.43□□□□□ -1.86
DDX58O95786 RPS29P6-201ENST00000438196 145 ntBASIC3.43□□□□□ -1.86
DDX58O95786 GPM6BP1-201ENST00000446387 144 ntBASIC3.43□□□□□ -1.86
DDX58O95786 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX58O95786 MTND1P12-201ENST00000455231 147 ntBASIC3.43□□□□□ -1.86
DDX58O95786 RNU6-956P-201ENST00000458868 103 ntBASIC3.43□□□□□ -1.86
DDX58O95786 RNU7-23P-201ENST00000459465 62 ntBASIC3.43□□□□□ -1.86
DDX58O95786 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.43□□□□□ -1.86
DDX58O95786 AC096725.1-201ENST00000514266 313 ntBASIC3.43□□□□□ -1.86
DDX58O95786 RNU6-143P-201ENST00000516942 93 ntBASIC3.43□□□□□ -1.86
DDX58O95786 RNA5SP337-201ENST00000517007 109 ntBASIC3.43□□□□□ -1.86
DDX58O95786 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX58O95786 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX58O95786 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX58O95786 TRAV37-201ENST00000553906 342 ntBASIC3.43□□□□□ -1.86
DDX58O95786 MIR3682-201ENST00000581338 84 ntBASIC3.43□□□□□ -1.86
DDX58O95786 PIGPP4-201ENST00000584447 307 ntBASIC3.43□□□□□ -1.86
DDX58O95786 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.43□□□□□ -1.86
DDX58O95786 AC098826.3-201ENST00000603823 466 ntBASIC3.43□□□□□ -1.86
DDX58O95786 AL136363.1-201ENST00000605349 337 ntBASIC3.43□□□□□ -1.86
DDX58O95786 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.43□□□□□ -1.86
DDX58O95786 AC107294.1-201ENST00000609524 467 ntBASIC3.43□□□□□ -1.86
DDX58O95786 AC099654.13-201ENST00000639774 207 ntBASIC3.43□□□□□ -1.86
DDX58O95786 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.43□□□□□ -1.86
DDX58O95786 AC091564.4-201ENST00000533934 2194 ntBASIC3.43□□□□□ -1.86
DDX58O95786 MAPK10-322ENST00000641485 4530 ntBASIC3.43□□□□□ -1.86
DDX58O95786 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.43□□□□□ -1.86
DDX58O95786 AL136360.1-201ENST00000503377 1900 ntBASIC3.42□□□□□ -1.86
DDX58O95786 API5P2-201ENST00000397055 1498 ntBASIC3.42□□□□□ -1.86
DDX58O95786 Y_RNA.201-201ENST00000364052 96 ntBASIC3.42□□□□□ -1.86
DDX58O95786 RNY1P12-201ENST00000364251 105 ntBASIC3.42□□□□□ -1.86
DDX58O95786 RNU6-512P-201ENST00000364438 103 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms