Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC109329.1-201ENST00000518744 317 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM13O60858 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM13O60858 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM13O60858 AC006064.5-201ENST00000541782 248 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM13O60858 RPL23AP84-201ENST00000571193 464 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM13O60858 AL390123.1-201ENST00000603216 237 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 AL512624.1-201ENST00000613638 469 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 MIR7702-201ENST00000621931 59 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM13O60858 AC027287.1-201ENST00000553115 1453 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM13O60858 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM13O60858 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM13O60858 AC068254.2-201ENST00000623938 3577 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM13O60858 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM13O60858 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM13O60858 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
TRIM13O60858 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM13O60858 Y_RNA.84-201ENST00000363011 104 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 SNORD113.2-201ENST00000364166 89 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 RNA5SP175-201ENST00000364275 119 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 Y_RNA.352-201ENST00000365439 102 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 RNU6-611P-201ENST00000384276 104 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TRIM13O60858 MIR1178-201ENST00000408396 91 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 AL353997.1-201ENST00000432936 108 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 SETP5-201ENST00000437270 562 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 OR2AQ1P-201ENST00000451972 200 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM13O60858 AP001086.1-201ENST00000494882 321 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM13O60858 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM13O60858 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM13O60858 AC092436.3-201ENST00000511788 257 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 SNORA31.6-201ENST00000516241 130 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM13O60858 AL161713.1-201ENST00000555538 145 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM13O60858 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM13O60858 MIR3934-201ENST00000579806 107 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 AC093227.2-201ENST00000589357 285 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM13O60858 AC008162.1-201ENST00000604718 254 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 AL670379.4-201ENST00000605279 254 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 MIR4727-201ENST00000622232 55 ntBASIC4.22□□□□□ -1.73
TRIM13O60858 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM13O60858 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM13O60858 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TRIM13O60858 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM13O60858 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM13O60858 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM13O60858 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM13O60858 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TRIM13O60858 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM13O60858 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM13O60858 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.21□□□□□ -1.73
TRIM13O60858 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
TRIM13O60858 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.21□□□□□ -1.73
TRIM13O60858 ZNF962P-201ENST00000443465 3140 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 Y_RNA.65-201ENST00000362846 100 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 Y_RNA.237-201ENST00000364439 102 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 RNU6-740P-201ENST00000364734 105 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 RPL23AP48-201ENST00000406913 488 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 AL603910.2-201ENST00000407268 136 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 RN7SKP229-201ENST00000410465 302 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 Y_RNA.793-201ENST00000411222 111 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 RNA5SP39-201ENST00000411245 120 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 SYF2P2-201ENST00000417620 583 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM13O60858 UBE2D3P2-201ENST00000424409 445 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 UBE2V1P4-201ENST00000425374 344 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 AL360081.1-201ENST00000428299 555 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM13O60858 RPS3AP46-201ENST00000448352 682 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 AL451050.1-201ENST00000450126 415 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 NDUFS5P3-201ENST00000450668 321 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM13O60858 Y_RNA.644-201ENST00000459006 113 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 AC010326.1-201ENST00000462726 602 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM13O60858 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM13O60858 OR7H2P-201ENST00000513483 306 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 Y_RNA.674-201ENST00000516362 113 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM13O60858 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
TRIM13O60858 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM13O60858 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM13O60858 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM13O60858 RN7SL690P-201ENST00000582087 240 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM13O60858 AC091953.5-201ENST00000622919 233 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM13O60858 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM13O60858 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms