Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RN7SKP219-201ENST00000516825 296 ntBASIC3.33□□□□□ -1.88
LDB2O43679 RNU6-840P-201ENST00000517275 65 ntBASIC3.33□□□□□ -1.88
LDB2O43679 CENPUP1-201ENST00000526649 1202 ntBASIC3.33□□□□□ -1.88
LDB2O43679 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.33□□□□□ -1.88
LDB2O43679 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.33□□□□□ -1.88
LDB2O43679 AC037471.2-201ENST00000564941 598 ntBASIC3.33□□□□□ -1.88
LDB2O43679 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.33□□□□□ -1.88
LDB2O43679 FAM60BP-201ENST00000578364 658 ntBASIC3.33□□□□□ -1.88
LDB2O43679 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.33□□□□□ -1.88
LDB2O43679 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.33□□□□□ -1.88
LDB2O43679 BNIP3P9-201ENST00000603714 553 ntBASIC3.33□□□□□ -1.88
LDB2O43679 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.33□□□□□ -1.88
LDB2O43679 AC008945.2-201ENST00000606056 604 ntBASIC3.33□□□□□ -1.88
LDB2O43679 SDR42E1P2-201ENST00000614861 481 ntBASIC3.33□□□□□ -1.88
LDB2O43679 AC063943.3-201ENST00000615562 356 ntBASIC3.33□□□□□ -1.88
LDB2O43679 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.33□□□□□ -1.88
LDB2O43679 SNORD39.4-201ENST00000620099 78 ntBASIC3.33□□□□□ -1.88
LDB2O43679 AL589994.2-201ENST00000621124 579 ntBASIC3.33□□□□□ -1.88
LDB2O43679 AL360181.4-201ENST00000621752 134 ntBASIC3.33□□□□□ -1.88
LDB2O43679 AC025034.2-201ENST00000623264 286 ntBASIC3.33□□□□□ -1.88
LDB2O43679 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.33□□□□□ -1.88
LDB2O43679 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.33□□□□□ -1.88
LDB2O43679 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.33□□□□□ -1.88
LDB2O43679 U6.114-201ENST00000636407 96 ntBASIC3.33□□□□□ -1.88
LDB2O43679 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.33□□□□□ -1.88
LDB2O43679 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LDB2O43679 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
LDB2O43679 AP001148.1-201ENST00000624124 2359 ntBASIC3.33□□□□□ -1.88
LDB2O43679 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LDB2O43679 AC092326.2-201ENST00000624772 1561 ntBASIC3.33□□□□□ -1.88
LDB2O43679 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.33□□□□□ -1.88
LDB2O43679 TNPO1P3-201ENST00000436471 2662 ntBASIC3.33□□□□□ -1.88
LDB2O43679 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LDB2O43679 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LDB2O43679 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LDB2O43679 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LDB2O43679 AC007496.3-201ENST00000624987 3443 ntBASIC3.32□□□□□ -1.88
LDB2O43679 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
LDB2O43679 RNU1-75P-201ENST00000347264 129 ntBASIC3.32□□□□□ -1.88
LDB2O43679 RNU1-33P-201ENST00000364249 162 ntBASIC3.32□□□□□ -1.88
LDB2O43679 RNA5SP267-201ENST00000364893 126 ntBASIC3.32□□□□□ -1.88
LDB2O43679 RNU6-61P-201ENST00000365528 109 ntBASIC3.32□□□□□ -1.88
LDB2O43679 SMIM11P1-201ENST00000369586 178 ntBASIC3.32□□□□□ -1.88
LDB2O43679 RNU6-1029P-201ENST00000384109 107 ntBASIC3.32□□□□□ -1.88
LDB2O43679 RNU6-1181P-201ENST00000384191 106 ntBASIC3.32□□□□□ -1.88
LDB2O43679 RNU6-328P-201ENST00000390887 106 ntBASIC3.32□□□□□ -1.88
LDB2O43679 RNU2-29P-201ENST00000410423 189 ntBASIC3.32□□□□□ -1.88
LDB2O43679 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.32□□□□□ -1.88
LDB2O43679 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.32□□□□□ -1.88
LDB2O43679 AC114491.1-201ENST00000416095 246 ntBASIC3.32□□□□□ -1.88
LDB2O43679 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.32□□□□□ -1.88
LDB2O43679 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.32□□□□□ -1.88
LDB2O43679 DUTP6-201ENST00000425573 462 ntBASIC3.32□□□□□ -1.88
LDB2O43679 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.32□□□□□ -1.88
LDB2O43679 RPL36AP53-201ENST00000432891 316 ntBASIC3.32□□□□□ -1.88
LDB2O43679 AC098614.3-201ENST00000438957 440 ntBASIC3.32□□□□□ -1.88
LDB2O43679 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.32□□□□□ -1.88
LDB2O43679 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.32□□□□□ -1.88
LDB2O43679 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.32□□□□□ -1.88
LDB2O43679 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.32□□□□□ -1.88
LDB2O43679 BX510359.1-201ENST00000456973 237 ntBASIC3.32□□□□□ -1.88
LDB2O43679 EIF4EP3-201ENST00000498782 656 ntBASIC3.32□□□□□ -1.88
LDB2O43679 AC092436.1-201ENST00000506450 503 ntBASIC3.32□□□□□ -1.88
LDB2O43679 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.32□□□□□ -1.88
LDB2O43679 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.32□□□□□ -1.88
LDB2O43679 AC114781.4-201ENST00000513707 639 ntBASIC3.32□□□□□ -1.88
LDB2O43679 IGKV2-23-201ENST00000518729 323 ntBASIC3.32□□□□□ -1.88
LDB2O43679 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.32□□□□□ -1.88
LDB2O43679 SUB1P1-201ENST00000524415 382 ntBASIC3.32□□□□□ -1.88
LDB2O43679 AP005435.4-201ENST00000529514 284 ntBASIC3.32□□□□□ -1.88
LDB2O43679 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.32□□□□□ -1.88
LDB2O43679 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.32□□□□□ -1.88
LDB2O43679 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.32□□□□□ -1.88
LDB2O43679 AL138976.2-201ENST00000563989 694 ntBASIC3.32□□□□□ -1.88
LDB2O43679 MIR4703-201ENST00000577728 79 ntBASIC3.32□□□□□ -1.88
LDB2O43679 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.32□□□□□ -1.88
LDB2O43679 MIR8058-201ENST00000615737 89 ntBASIC3.32□□□□□ -1.88
LDB2O43679 AC010133.1-201ENST00000615809 842 ntBASIC3.32□□□□□ -1.88
LDB2O43679 AC010338.1-201ENST00000621823 717 ntBASIC3.32□□□□□ -1.88
LDB2O43679 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LDB2O43679 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LDB2O43679 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.32□□□□□ -1.88
LDB2O43679 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LDB2O43679 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
LDB2O43679 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.32□□□□□ -1.88
LDB2O43679 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LDB2O43679 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.32□□□□□ -1.88
LDB2O43679 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LDB2O43679 SDAD1P2-201ENST00000441308 2028 ntBASIC3.31□□□□□ -1.88
LDB2O43679 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.31□□□□□ -1.88
LDB2O43679 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LDB2O43679 API5P2-201ENST00000397055 1498 ntBASIC3.31□□□□□ -1.88
LDB2O43679 CBX3P1-201ENST00000325243 554 ntBASIC3.31□□□□□ -1.88
LDB2O43679 RNU6-552P-201ENST00000362869 119 ntBASIC3.31□□□□□ -1.88
LDB2O43679 Y_RNA.70-201ENST00000362886 110 ntBASIC3.31□□□□□ -1.88
LDB2O43679 Y_RNA.72-201ENST00000362894 103 ntBASIC3.31□□□□□ -1.88
LDB2O43679 Y_RNA.86-201ENST00000363020 111 ntBASIC3.31□□□□□ -1.88
LDB2O43679 Y_RNA.279-201ENST00000364763 95 ntBASIC3.31□□□□□ -1.88
LDB2O43679 RNU6-946P-201ENST00000383878 107 ntBASIC3.31□□□□□ -1.88
LDB2O43679 RNU6-701P-201ENST00000384059 107 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms