Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RNU6-1226P-201ENST00000384317 107 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.46□□□□□ -1.86
SMAD6O43541 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SMAD6O43541 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.46□□□□□ -1.86
SMAD6O43541 Y_RNA.615-201ENST00000410769 117 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 RN7SKP140-201ENST00000411196 284 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 MTCYBP8-201ENST00000422855 651 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 DUTP6-201ENST00000425573 462 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.46□□□□□ -1.86
SMAD6O43541 AC005019.1-201ENST00000436455 431 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 HMGB1P18-201ENST00000438801 619 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 AC073415.1-201ENST00000449240 153 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 AC010285.1-201ENST00000470580 392 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.46□□□□□ -1.86
SMAD6O43541 HMGB1P22-201ENST00000505315 124 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.46□□□□□ -1.86
SMAD6O43541 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.46□□□□□ -1.86
SMAD6O43541 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.46□□□□□ -1.86
SMAD6O43541 AC024224.1-201ENST00000538284 609 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.46□□□□□ -1.86
SMAD6O43541 AC020661.2-201ENST00000560114 134 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.46□□□□□ -1.86
SMAD6O43541 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.46□□□□□ -1.86
SMAD6O43541 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.46□□□□□ -1.86
SMAD6O43541 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.46□□□□□ -1.86
SMAD6O43541 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.46□□□□□ -1.86
SMAD6O43541 AC068790.3-201ENST00000602988 553 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 RMST_8.1-201ENST00000610287 165 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 AC096577.2-201ENST00000611455 153 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
SMAD6O43541 ASNSP3-201ENST00000451989 1306 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SMAD6O43541 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.45□□□□□ -1.86
SMAD6O43541 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SMAD6O43541 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SMAD6O43541 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SMAD6O43541 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SMAD6O43541 AC110774.1-201ENST00000623567 2018 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SMAD6O43541 RNU6-629P-201ENST00000384061 103 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 RNU6-606P-201ENST00000384721 111 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 RN7SKP111-201ENST00000410349 271 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 OR1AA1P-201ENST00000419597 916 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 NCOR1P3-201ENST00000420479 303 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.45□□□□□ -1.86
SMAD6O43541 AL645937.1-202ENST00000421799 937 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 PSMA6P3-201ENST00000428242 164 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.45□□□□□ -1.86
SMAD6O43541 AL357552.1-201ENST00000445254 415 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SMAD6O43541 snoU13.24-201ENST00000458998 104 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 snoU13.3-201ENST00000459441 104 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 RNU6-329P-201ENST00000459618 107 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 AC093767.1-201ENST00000504523 156 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 FCF1P8-201ENST00000510322 597 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.45□□□□□ -1.86
SMAD6O43541 Y_RNA.691-201ENST00000516611 103 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 AC093331.1-201ENST00000521474 169 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.45□□□□□ -1.86
SMAD6O43541 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.45□□□□□ -1.86
SMAD6O43541 AP003385.6-201ENST00000531603 374 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.45□□□□□ -1.86
SMAD6O43541 AC060771.1-201ENST00000582031 164 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 AP001029.3-201ENST00000588063 596 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 GLUD1P4-201ENST00000590914 418 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 AC104237.2-201ENST00000612456 443 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 AC009318.4-201ENST00000620496 486 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.45□□□□□ -1.86
SMAD6O43541 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SMAD6O43541 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SMAD6O43541 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SMAD6O43541 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.44□□□□□ -1.86
SMAD6O43541 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.44□□□□□ -1.86
SMAD6O43541 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SMAD6O43541 AL359893.1-201ENST00000447628 1580 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 RNU6-97P-201ENST00000363387 104 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 Y_RNA.367-201ENST00000365544 101 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.44□□□□□ -1.86
SMAD6O43541 Y_RNA.384-201ENST00000383909 102 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 RNU6-39P-201ENST00000384344 107 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 MT-TC-201ENST00000387405 66 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 SNORA75.4-201ENST00000391278 119 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 RNU4-65P-201ENST00000410473 140 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.44□□□□□ -1.86
SMAD6O43541 Z99755.1-201ENST00000414048 380 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 AL158156.1-201ENST00000422509 473 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SMAD6O43541 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.44□□□□□ -1.86
SMAD6O43541 AC137499.1-201ENST00000427602 88 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 RPS20P5-201ENST00000434808 360 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.44□□□□□ -1.86
SMAD6O43541 BRK1P2-201ENST00000442875 223 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 DDX3P2-201ENST00000446138 111 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 snoU13.8-201ENST00000458890 104 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 AP001992.1-205ENST00000462248 379 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.44□□□□□ -1.86
SMAD6O43541 RPL21P13-201ENST00000488305 481 ntBASIC3.44□□□□□ -1.86
SMAD6O43541 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.44□□□□□ -1.86
SMAD6O43541 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms