Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.49□□□□□ -2.01
MSH4O15457 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.49□□□□□ -2.01
MSH4O15457 AC090888.2-201ENST00000559765 1144 ntBASIC2.49□□□□□ -2.01
MSH4O15457 MIR1273D-201ENST00000577266 86 ntBASIC2.49□□□□□ -2.01
MSH4O15457 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.49□□□□□ -2.01
MSH4O15457 DPPA3P3-201ENST00000603842 430 ntBASIC2.49□□□□□ -2.01
MSH4O15457 MTND4LP5-201ENST00000605152 292 ntBASIC2.49□□□□□ -2.01
MSH4O15457 AC103710.1-201ENST00000610003 901 ntBASIC2.49□□□□□ -2.01
MSH4O15457 FTX_3.1-201ENST00000610451 147 ntBASIC2.49□□□□□ -2.01
MSH4O15457 AC087241.4-201ENST00000612441 480 ntBASIC2.49□□□□□ -2.01
MSH4O15457 AL031667.3-201ENST00000620124 655 ntBASIC2.49□□□□□ -2.01
MSH4O15457 AC009831.4-201ENST00000620744 325 ntBASIC2.49□□□□□ -2.01
MSH4O15457 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.49□□□□□ -2.01
MSH4O15457 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
MSH4O15457 AL391994.1-201ENST00000254724 282 ntBASIC2.48□□□□□ -2.01
MSH4O15457 FO393413.1-201ENST00000402892 195 ntBASIC2.48□□□□□ -2.01
MSH4O15457 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.48□□□□□ -2.01
MSH4O15457 AL513477.1-202ENST00000417061 214 ntBASIC2.48□□□□□ -2.01
MSH4O15457 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.48□□□□□ -2.01
MSH4O15457 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.48□□□□□ -2.01
MSH4O15457 AC244035.1-201ENST00000430042 390 ntBASIC2.48□□□□□ -2.01
MSH4O15457 UBE2D3P1-201ENST00000436669 444 ntBASIC2.48□□□□□ -2.01
MSH4O15457 AC005094.1-201ENST00000440420 368 ntBASIC2.48□□□□□ -2.01
MSH4O15457 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.48□□□□□ -2.01
MSH4O15457 RNU6-927P-201ENST00000516199 100 ntBASIC2.48□□□□□ -2.01
MSH4O15457 RNA5SP200-201ENST00000516360 103 ntBASIC2.48□□□□□ -2.01
MSH4O15457 RNU6-64P-201ENST00000517119 105 ntBASIC2.48□□□□□ -2.01
MSH4O15457 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
MSH4O15457 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.48□□□□□ -2.01
MSH4O15457 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.48□□□□□ -2.01
MSH4O15457 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.48□□□□□ -2.01
MSH4O15457 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
MSH4O15457 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.48□□□□□ -2.01
MSH4O15457 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.48□□□□□ -2.01
MSH4O15457 AC010546.1-201ENST00000569391 485 ntBASIC2.48□□□□□ -2.01
MSH4O15457 AC239868.4-201ENST00000608318 671 ntBASIC2.48□□□□□ -2.01
MSH4O15457 SNHG22-203ENST00000617833 660 ntBASIC2.48□□□□□ -2.01
MSH4O15457 AC007490.1-201ENST00000624321 703 ntBASIC2.48□□□□□ -2.01
MSH4O15457 AL136313.1-201ENST00000624804 202 ntBASIC2.48□□□□□ -2.01
MSH4O15457 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
MSH4O15457 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
MSH4O15457 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
MSH4O15457 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
MSH4O15457 RNU6-884P-201ENST00000363889 107 ntBASIC2.47□□□□□ -2.01
MSH4O15457 RNU5A-8P-201ENST00000364102 114 ntBASIC2.47□□□□□ -2.01
MSH4O15457 RNU6-278P-201ENST00000390945 109 ntBASIC2.47□□□□□ -2.01
MSH4O15457 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.47□□□□□ -2.01
MSH4O15457 AL359634.1-202ENST00000404721 284 ntBASIC2.47□□□□□ -2.01
MSH4O15457 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.47□□□□□ -2.01
MSH4O15457 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.47□□□□□ -2.01
MSH4O15457 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.47□□□□□ -2.01
MSH4O15457 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.47□□□□□ -2.01
MSH4O15457 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.47□□□□□ -2.01
MSH4O15457 AC010153.1-201ENST00000432862 727 ntBASIC2.47□□□□□ -2.01
MSH4O15457 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.47□□□□□ -2.01
MSH4O15457 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.47□□□□□ -2.01
MSH4O15457 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.47□□□□□ -2.01
MSH4O15457 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.47□□□□□ -2.01
MSH4O15457 RPL26P9-201ENST00000457466 433 ntBASIC2.47□□□□□ -2.01
MSH4O15457 AC013267.1-201ENST00000458227 267 ntBASIC2.47□□□□□ -2.01
MSH4O15457 MRPS17P3-201ENST00000465453 385 ntBASIC2.47□□□□□ -2.01
MSH4O15457 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.47□□□□□ -2.01
MSH4O15457 RPL23AP41-201ENST00000484754 458 ntBASIC2.47□□□□□ -2.01
MSH4O15457 AC114786.4-201ENST00000508771 728 ntBASIC2.47□□□□□ -2.01
MSH4O15457 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
MSH4O15457 AC114797.1-201ENST00000514003 728 ntBASIC2.47□□□□□ -2.01
MSH4O15457 MRPS36P3-201ENST00000519284 130 ntBASIC2.47□□□□□ -2.01
MSH4O15457 AP001372.4-201ENST00000524889 472 ntBASIC2.47□□□□□ -2.01
MSH4O15457 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.47□□□□□ -2.01
MSH4O15457 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.47□□□□□ -2.01
MSH4O15457 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.47□□□□□ -2.01
MSH4O15457 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.47□□□□□ -2.01
MSH4O15457 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.47□□□□□ -2.01
MSH4O15457 MIR4307-201ENST00000582802 84 ntBASIC2.47□□□□□ -2.01
MSH4O15457 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.47□□□□□ -2.01
MSH4O15457 AL355877.2-201ENST00000603670 358 ntBASIC2.47□□□□□ -2.01
MSH4O15457 AP000811.1-201ENST00000603803 651 ntBASIC2.47□□□□□ -2.01
MSH4O15457 AC107214.2-201ENST00000608204 634 ntBASIC2.47□□□□□ -2.01
MSH4O15457 AL355472.4-201ENST00000610233 626 ntBASIC2.47□□□□□ -2.01
MSH4O15457 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
MSH4O15457 AC021755.4-201ENST00000616620 456 ntBASIC2.47□□□□□ -2.01
MSH4O15457 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.47□□□□□ -2.01
MSH4O15457 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
MSH4O15457 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
MSH4O15457 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
MSH4O15457 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
MSH4O15457 U8.2-201ENST00000363156 134 ntBASIC2.46□□□□□ -2.02
MSH4O15457 Y_RNA.245-201ENST00000364493 95 ntBASIC2.46□□□□□ -2.02
MSH4O15457 RNU6-660P-201ENST00000364566 109 ntBASIC2.46□□□□□ -2.02
MSH4O15457 RNU6-1180P-201ENST00000364935 107 ntBASIC2.46□□□□□ -2.02
MSH4O15457 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.46□□□□□ -2.02
MSH4O15457 RPL17P12-201ENST00000413391 526 ntBASIC2.46□□□□□ -2.02
MSH4O15457 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.46□□□□□ -2.02
MSH4O15457 DPH3P2-201ENST00000422618 250 ntBASIC2.46□□□□□ -2.02
MSH4O15457 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.46□□□□□ -2.02
MSH4O15457 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.46□□□□□ -2.02
MSH4O15457 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.46□□□□□ -2.02
MSH4O15457 Z80107.1-201ENST00000436830 412 ntBASIC2.46□□□□□ -2.02
MSH4O15457 RPS15AP27-201ENST00000449183 343 ntBASIC2.46□□□□□ -2.02
MSH4O15457 AL353705.4-201ENST00000449661 238 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms