Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 BX842559.1-201ENST00000419615 532 ntBASIC3.78□□□□□ -1.8
TRIM38O00635 AL159169.1-201ENST00000421119 127 ntBASIC3.78□□□□□ -1.8
TRIM38O00635 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.78□□□□□ -1.8
TRIM38O00635 AC108059.2-201ENST00000434626 151 ntBASIC3.78□□□□□ -1.8
TRIM38O00635 RPL7P54-201ENST00000438336 674 ntBASIC3.78□□□□□ -1.8
TRIM38O00635 RPL23AP20-201ENST00000447965 421 ntBASIC3.78□□□□□ -1.8
TRIM38O00635 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM38O00635 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM38O00635 RPL30P5-201ENST00000494923 336 ntBASIC3.78□□□□□ -1.8
TRIM38O00635 AC103851.1-201ENST00000506833 274 ntBASIC3.78□□□□□ -1.8
TRIM38O00635 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM38O00635 RNU6-1256P-201ENST00000516539 103 ntBASIC3.78□□□□□ -1.8
TRIM38O00635 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM38O00635 AC004024.1-201ENST00000549244 247 ntBASIC3.78□□□□□ -1.8
TRIM38O00635 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM38O00635 AC006504.6-201ENST00000590142 199 ntBASIC3.78□□□□□ -1.8
TRIM38O00635 AC243960.4-201ENST00000600532 288 ntBASIC3.78□□□□□ -1.8
TRIM38O00635 AC124303.1-201ENST00000605703 360 ntBASIC3.78□□□□□ -1.8
TRIM38O00635 AL390240.1-201ENST00000612950 384 ntBASIC3.78□□□□□ -1.8
TRIM38O00635 RMST_7.1-201ENST00000621935 268 ntBASIC3.78□□□□□ -1.8
TRIM38O00635 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM38O00635 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM38O00635 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
TRIM38O00635 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.78□□□□□ -1.81
TRIM38O00635 AL136164.4-201ENST00000625013 2135 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM38O00635 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM38O00635 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TRIM38O00635 Y_RNA.146-201ENST00000363549 102 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM38O00635 AL354719.1-201ENST00000406535 843 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 AL591034.1-201ENST00000407447 340 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM38O00635 AL365400.1-201ENST00000431854 640 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 RANP8-201ENST00000444720 713 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 AC009237.8-201ENST00000445492 379 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 CBWD4P-201ENST00000445695 655 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 RPL31P60-201ENST00000478450 367 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM38O00635 AC112206.3-201ENST00000514578 389 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 SNORA31.3-201ENST00000516029 96 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 RN7SKP83-201ENST00000516512 178 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 RNU6-1046P-201ENST00000516538 107 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 ELOCP31-201ENST00000540463 467 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.77□□□□□ -1.81
TRIM38O00635 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM38O00635 AL121576.1-201ENST00000556055 276 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 AC093249.1-201ENST00000567049 203 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 MIR3668-201ENST00000582138 75 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 MIR3922-201ENST00000585192 84 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.77□□□□□ -1.81
TRIM38O00635 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM38O00635 AC011373.1-201ENST00000607270 237 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 U7.8-201ENST00000619968 63 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 TPTEP1-208ENST00000636884 213 ntBASIC3.77□□□□□ -1.81
TRIM38O00635 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM38O00635 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM38O00635 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM38O00635 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM38O00635 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM38O00635 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM38O00635 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM38O00635 CEP170P1-201ENST00000502249 4587 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM38O00635 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM38O00635 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM38O00635 RNA5SP295-201ENST00000362655 121 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM38O00635 RNU6-474P-201ENST00000384243 107 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 RNU6-39P-201ENST00000384344 107 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 RNU6-817P-201ENST00000391083 104 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 RNU6-1197P-201ENST00000391183 107 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 AC068050.1-201ENST00000394891 380 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 MIR548P-201ENST00000408336 84 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 RN7SKP53-201ENST00000411337 315 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 RPS29P4-201ENST00000414733 161 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 UBE2D3P2-201ENST00000424409 445 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM38O00635 AC083863.1-201ENST00000438811 231 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM38O00635 Y_RNA.632-201ENST00000459189 102 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 AC087588.1-201ENST00000462203 316 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM38O00635 RPL36AP51-201ENST00000487216 318 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 AC023194.1-201ENST00000493084 308 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 HMGN1P11-201ENST00000508668 303 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 AC104619.4-201ENST00000510773 249 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM38O00635 SCARNA24.1-201ENST00000516465 137 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 RNU7-30P-201ENST00000516835 62 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 RNU6-445P-201ENST00000516949 107 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 AC022695.1-201ENST00000522089 237 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM38O00635 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM38O00635 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM38O00635 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM38O00635 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM38O00635 AC067852.3-201ENST00000589177 561 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 AC002545.1-201ENST00000592511 181 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms