Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.75□□□□□ -2.29
CACNA1AO00555 AC008962.1-201ENST00000605729 304 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 AC027335.2-201ENST00000624030 375 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 Y_RNA.203-201ENST00000364106 102 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 FO393413.1-201ENST00000402892 195 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 RNU6-955P-201ENST00000410497 104 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 RNU4-78P-201ENST00000410940 126 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 ZNF90P2-204ENST00000419323 1075 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 HMGB3P10-201ENST00000434734 572 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 RPL7P31-201ENST00000450192 724 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 AC104685.1-201ENST00000502445 371 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 AC091435.1-201ENST00000505442 584 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 RN7SKP179-201ENST00000516126 217 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 MTCO1P47-201ENST00000523889 1271 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.75□□□□□ -2.29
CACNA1AO00555 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.74□□□□□ -2.29
CACNA1AO00555 Y_RNA.475-201ENST00000384345 101 ntBASIC0.74□□□□□ -2.29
CACNA1AO00555 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.74□□□□□ -2.29
CACNA1AO00555 RPS25P9-201ENST00000435591 252 ntBASIC0.74□□□□□ -2.29
CACNA1AO00555 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.74□□□□□ -2.29
CACNA1AO00555 SNORD108-201ENST00000459332 71 ntBASIC0.74□□□□□ -2.29
CACNA1AO00555 snoU13.21-201ENST00000459368 105 ntBASIC0.74□□□□□ -2.29
CACNA1AO00555 RNU6-496P-201ENST00000516145 99 ntBASIC0.74□□□□□ -2.29
CACNA1AO00555 RNU2-44P-201ENST00000516795 194 ntBASIC0.74□□□□□ -2.29
CACNA1AO00555 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.74□□□□□ -2.29
CACNA1AO00555 SNORD39.2-201ENST00000579995 76 ntBASIC0.74□□□□□ -2.29
CACNA1AO00555 AC140725.3-201ENST00000616193 880 ntBASIC0.74□□□□□ -2.29
CACNA1AO00555 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
CACNA1AO00555 AC080100.1-201ENST00000624239 5356 ntBASIC0.74□□□□□ -2.29
CACNA1AO00555 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.74□□□□□ -2.29
CACNA1AO00555 AL590556.1-201ENST00000423231 483 ntBASIC0.74□□□□□ -2.29
CACNA1AO00555 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.74□□□□□ -2.29
CACNA1AO00555 CASP3P1-201ENST00000446037 609 ntBASIC0.74□□□□□ -2.29
CACNA1AO00555 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.74□□□□□ -2.29
CACNA1AO00555 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.74□□□□□ -2.29
CACNA1AO00555 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.74□□□□□ -2.29
CACNA1AO00555 XIAPP1-201ENST00000603162 600 ntBASIC0.74□□□□□ -2.29
CACNA1AO00555 AC004987.4-201ENST00000603383 338 ntBASIC0.74□□□□□ -2.29
CACNA1AO00555 AC103810.9-201ENST00000606688 112 ntBASIC0.74□□□□□ -2.29
CACNA1AO00555 AL136520.1-201ENST00000600311 1322 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CACNA1AO00555 MIR101-1-201ENST00000362265 75 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 RNU6-799P-201ENST00000363567 107 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 Y_RNA.428-201ENST00000384078 102 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 Y_RNA.490-201ENST00000384413 102 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 AC074117.2-201ENST00000417130 397 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 Z75741.2-201ENST00000417272 1167 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 AC241520.1-201ENST00000422654 1099 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 RPS29P28-201ENST00000446439 141 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 AC048346.1-201ENST00000510247 144 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 MRPS17P9-201ENST00000511924 393 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC0.73□□□□□ -2.29
CACNA1AO00555 MIR4458-201ENST00000578872 75 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 AC123786.2-201ENST00000603459 275 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.73□□□□□ -2.29
CACNA1AO00555 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CACNA1AO00555 AL591034.1-201ENST00000407447 340 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 AC013268.2-201ENST00000420753 337 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 VN1R42P-201ENST00000424651 344 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 AC022022.1-201ENST00000430304 178 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 MRPL42P6-201ENST00000486397 371 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.73□□□□□ -2.29
CACNA1AO00555 AC083923.1-201ENST00000523708 376 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CACNA1AO00555 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.73□□□□□ -2.29
CACNA1AO00555 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CACNA1AO00555 DUXAP4-201ENST00000603046 613 ntBASIC0.73□□□□□ -2.29
CACNA1AO00555 RNU6-152P-201ENST00000384037 107 ntBASIC0.72□□□□□ -2.29
CACNA1AO00555 RNU4-72P-201ENST00000410754 173 ntBASIC0.72□□□□□ -2.29
CACNA1AO00555 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.72□□□□□ -2.29
CACNA1AO00555 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.72□□□□□ -2.29
CACNA1AO00555 HSPE1P22-201ENST00000456856 327 ntBASIC0.72□□□□□ -2.29
CACNA1AO00555 RNU1-104P-201ENST00000517280 175 ntBASIC0.72□□□□□ -2.29
CACNA1AO00555 AC020658.4-201ENST00000613987 684 ntBASIC0.72□□□□□ -2.29
CACNA1AO00555 AL049641.1-201ENST00000441055 1948 ntBASIC0.72□□□□□ -2.29
CACNA1AO00555 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC0.72□□□□□ -2.29
CACNA1AO00555 ATG12P2-201ENST00000456830 416 ntBASIC0.72□□□□□ -2.29
CACNA1AO00555 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CACNA1AO00555 AC096745.1-201ENST00000509945 370 ntBASIC0.72□□□□□ -2.29
CACNA1AO00555 CDC42P4-201ENST00000510507 563 ntBASIC0.72□□□□□ -2.29
CACNA1AO00555 RN7SKP5-201ENST00000517045 272 ntBASIC0.72□□□□□ -2.29
CACNA1AO00555 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC0.72□□□□□ -2.29
CACNA1AO00555 AL627230.6-201ENST00000611129 280 ntBASIC0.72□□□□□ -2.29
CACNA1AO00555 AC009318.3-201ENST00000616916 503 ntBASIC0.72□□□□□ -2.29
CACNA1AO00555 RLIMP2-201ENST00000427891 1563 ntBASIC0.72□□□□□ -2.29
CACNA1AO00555 AL355497.1-201ENST00000406262 551 ntBASIC0.71□□□□□ -2.3
CACNA1AO00555 SNORD56-201ENST00000413522 71 ntBASIC0.71□□□□□ -2.3
CACNA1AO00555 PRELID3BP11-201ENST00000414230 479 ntBASIC0.71□□□□□ -2.3
CACNA1AO00555 AC118469.1-201ENST00000442943 488 ntBASIC0.71□□□□□ -2.3
CACNA1AO00555 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC0.71□□□□□ -2.3
CACNA1AO00555 AL121769.1-201ENST00000469473 401 ntBASIC0.71□□□□□ -2.3
CACNA1AO00555 CCT4P2-201ENST00000233836 1548 ntBASIC0.71□□□□□ -2.3
CACNA1AO00555 SNORA51.6-201ENST00000384151 125 ntBASIC0.71□□□□□ -2.3
CACNA1AO00555 TRGV6-201ENST00000417928 299 ntBASIC0.71□□□□□ -2.3
CACNA1AO00555 UBE2FP3-201ENST00000436366 524 ntBASIC0.71□□□□□ -2.3
CACNA1AO00555 HMGN2P13-201ENST00000476476 274 ntBASIC0.71□□□□□ -2.3
CACNA1AO00555 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.71□□□□□ -2.3
CACNA1AO00555 SMARCE1P4-201ENST00000523647 241 ntBASIC0.71□□□□□ -2.3
CACNA1AO00555 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms