Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RTCAO00442 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.88□□□□□ -1.95
RTCAO00442 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RTCAO00442 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.88□□□□□ -1.95
RTCAO00442 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RTCAO00442 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RTCAO00442 VTRNA1-1-201ENST00000363120 99 ntBASIC2.88□□□□□ -1.95
RTCAO00442 RNU6-1083P-201ENST00000384022 107 ntBASIC2.88□□□□□ -1.95
RTCAO00442 RNU6-297P-201ENST00000384636 107 ntBASIC2.88□□□□□ -1.95
RTCAO00442 RNU2-8P-201ENST00000410727 190 ntBASIC2.88□□□□□ -1.95
RTCAO00442 AC023141.4-201ENST00000412031 328 ntBASIC2.88□□□□□ -1.95
RTCAO00442 RPL21P24-201ENST00000413752 448 ntBASIC2.88□□□□□ -1.95
RTCAO00442 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.88□□□□□ -1.95
RTCAO00442 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.88□□□□□ -1.95
RTCAO00442 BPY2DP-201ENST00000422208 265 ntBASIC2.88□□□□□ -1.95
RTCAO00442 AC019097.1-201ENST00000424783 735 ntBASIC2.88□□□□□ -1.95
RTCAO00442 AC009961.2-201ENST00000435771 251 ntBASIC2.88□□□□□ -1.95
RTCAO00442 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.88□□□□□ -1.95
RTCAO00442 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.88□□□□□ -1.95
RTCAO00442 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.88□□□□□ -1.95
RTCAO00442 USP9YP15-201ENST00000442391 422 ntBASIC2.88□□□□□ -1.95
RTCAO00442 USP9YP29-201ENST00000445112 563 ntBASIC2.88□□□□□ -1.95
RTCAO00442 UQCRHP3-201ENST00000451503 251 ntBASIC2.88□□□□□ -1.95
RTCAO00442 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.88□□□□□ -1.95
RTCAO00442 RNU6-956P-201ENST00000458868 103 ntBASIC2.88□□□□□ -1.95
RTCAO00442 RN7SL75P-201ENST00000461926 281 ntBASIC2.88□□□□□ -1.95
RTCAO00442 AC105252.1-201ENST00000503089 286 ntBASIC2.88□□□□□ -1.95
RTCAO00442 AC010424.1-201ENST00000506336 297 ntBASIC2.88□□□□□ -1.95
RTCAO00442 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.88□□□□□ -1.95
RTCAO00442 Y_RNA.672-201ENST00000516289 104 ntBASIC2.88□□□□□ -1.95
RTCAO00442 AC009812.2-201ENST00000517657 457 ntBASIC2.88□□□□□ -1.95
RTCAO00442 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RTCAO00442 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RTCAO00442 AC123904.3-201ENST00000547218 814 ntBASIC2.88□□□□□ -1.95
RTCAO00442 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.88□□□□□ -1.95
RTCAO00442 MTND4LP5-201ENST00000605152 292 ntBASIC2.88□□□□□ -1.95
RTCAO00442 AC008277.2-201ENST00000605196 797 ntBASIC2.88□□□□□ -1.95
RTCAO00442 AC103710.2-201ENST00000609912 942 ntBASIC2.88□□□□□ -1.95
RTCAO00442 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
RTCAO00442 AC007998.5-201ENST00000622938 237 ntBASIC2.88□□□□□ -1.95
RTCAO00442 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RTCAO00442 MIR622-201ENST00000638396 96 ntBASIC2.88□□□□□ -1.95
RTCAO00442 TEX21P-201ENST00000447107 1476 ntBASIC2.88□□□□□ -1.95
RTCAO00442 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.88□□□□□ -1.95
RTCAO00442 ELF2P3-201ENST00000445099 1506 ntBASIC2.88□□□□□ -1.95
RTCAO00442 FARSBP1-201ENST00000435808 1778 ntBASIC2.87□□□□□ -1.95
RTCAO00442 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
RTCAO00442 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
RTCAO00442 Y_RNA.51-201ENST00000362725 102 ntBASIC2.87□□□□□ -1.95
RTCAO00442 SNORA75-201ENST00000384158 137 ntBASIC2.87□□□□□ -1.95
RTCAO00442 SNORA40.3-201ENST00000390964 122 ntBASIC2.87□□□□□ -1.95
RTCAO00442 U3.26-201ENST00000391236 204 ntBASIC2.87□□□□□ -1.95
RTCAO00442 RPL23AP32-201ENST00000395315 459 ntBASIC2.87□□□□□ -1.95
RTCAO00442 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.87□□□□□ -1.95
RTCAO00442 RNA5SP344-201ENST00000411081 104 ntBASIC2.87□□□□□ -1.95
RTCAO00442 RPL26P27-201ENST00000414397 437 ntBASIC2.87□□□□□ -1.95
RTCAO00442 ELOCP17-201ENST00000414751 326 ntBASIC2.87□□□□□ -1.95
RTCAO00442 ZNF90P2-204ENST00000419323 1075 ntBASIC2.87□□□□□ -1.95
RTCAO00442 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.87□□□□□ -1.95
RTCAO00442 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.87□□□□□ -1.95
RTCAO00442 SUMO1P4-201ENST00000429430 302 ntBASIC2.87□□□□□ -1.95
RTCAO00442 AC010153.1-201ENST00000432862 727 ntBASIC2.87□□□□□ -1.95
RTCAO00442 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.87□□□□□ -1.95
RTCAO00442 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.87□□□□□ -1.95
RTCAO00442 RN7SL499P-201ENST00000481141 276 ntBASIC2.87□□□□□ -1.95
RTCAO00442 RNU6-390P-201ENST00000516259 103 ntBASIC2.87□□□□□ -1.95
RTCAO00442 RN7SKP272-201ENST00000516988 232 ntBASIC2.87□□□□□ -1.95
RTCAO00442 RNU2-46P-201ENST00000517038 113 ntBASIC2.87□□□□□ -1.95
RTCAO00442 AP003181.2-201ENST00000528941 181 ntBASIC2.87□□□□□ -1.95
RTCAO00442 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.87□□□□□ -1.95
RTCAO00442 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.87□□□□□ -1.95
RTCAO00442 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.87□□□□□ -1.95
RTCAO00442 AC024909.2-201ENST00000553035 286 ntBASIC2.87□□□□□ -1.95
RTCAO00442 RPS3AP4-201ENST00000555161 764 ntBASIC2.87□□□□□ -1.95
RTCAO00442 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.87□□□□□ -1.95
RTCAO00442 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.87□□□□□ -1.95
RTCAO00442 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.87□□□□□ -1.95
RTCAO00442 NRBF2P1-201ENST00000587407 859 ntBASIC2.87□□□□□ -1.95
RTCAO00442 RSL24D1P11-201ENST00000591045 491 ntBASIC2.87□□□□□ -1.95
RTCAO00442 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.87□□□□□ -1.95
RTCAO00442 AC012493.2-201ENST00000595083 291 ntBASIC2.87□□□□□ -1.95
RTCAO00442 BNIP3P33-201ENST00000598912 569 ntBASIC2.87□□□□□ -1.95
RTCAO00442 AL358072.1-201ENST00000604156 575 ntBASIC2.87□□□□□ -1.95
RTCAO00442 AC064807.4-201ENST00000607201 407 ntBASIC2.87□□□□□ -1.95
RTCAO00442 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.87□□□□□ -1.95
RTCAO00442 PISRT1-201ENST00000626175 531 ntBASIC2.87□□□□□ -1.95
RTCAO00442 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.87□□□□□ -1.95
RTCAO00442 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RTCAO00442 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.87□□□□□ -1.95
RTCAO00442 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RTCAO00442 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
RTCAO00442 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RTCAO00442 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.86□□□□□ -1.95
RTCAO00442 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.86□□□□□ -1.95
RTCAO00442 GNG5P1-201ENST00000255500 204 ntBASIC2.86□□□□□ -1.95
RTCAO00442 U8.3-201ENST00000363321 132 ntBASIC2.86□□□□□ -1.95
RTCAO00442 RPL21P3-201ENST00000395517 478 ntBASIC2.86□□□□□ -1.95
RTCAO00442 CDK8P2-201ENST00000415020 547 ntBASIC2.86□□□□□ -1.95
RTCAO00442 AL096701.2-201ENST00000416920 238 ntBASIC2.86□□□□□ -1.95
RTCAO00442 AL589872.1-201ENST00000426602 288 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms