Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.78□□□□□ -1.8
FOXN3O00409 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.78□□□□□ -1.8
FOXN3O00409 GTF2IP20-201ENST00000431663 360 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 GPM6BP2-201ENST00000432046 144 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.78□□□□□ -1.8
FOXN3O00409 HSPD1P21-201ENST00000436541 245 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.78□□□□□ -1.8
FOXN3O00409 USP9YP8-201ENST00000441913 500 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 GPM6BP1-201ENST00000446387 144 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 AL118520.1-201ENST00000450770 291 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 MTND3P10-201ENST00000450967 341 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXN3O00409 AC092001.1-201ENST00000453012 261 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 CECR9-201ENST00000453421 199 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXN3O00409 AC087588.1-201ENST00000462203 316 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 RN7SL594P-201ENST00000470590 287 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 RPL39P36-201ENST00000490784 156 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 HMGN1P11-201ENST00000508668 303 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXN3O00409 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.78□□□□□ -1.8
FOXN3O00409 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXN3O00409 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXN3O00409 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXN3O00409 AC008945.2-201ENST00000606056 604 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 MIR15A-201ENST00000607334 83 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 AC107294.1-201ENST00000609524 467 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 AC025253.1-201ENST00000613623 543 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 AP003355.3-201ENST00000623465 114 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.78□□□□□ -1.8
FOXN3O00409 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
FOXN3O00409 AC110774.1-201ENST00000623567 2018 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FOXN3O00409 ZNF826P-207ENST00000622273 1910 ntBASIC3.78□□□□□ -1.81
FOXN3O00409 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
FOXN3O00409 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXN3O00409 RNA5SP124-201ENST00000362739 110 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 Y_RNA.160-201ENST00000363677 92 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
FOXN3O00409 RNU6-877P-201ENST00000383868 107 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 Y_RNA.573-201ENST00000384763 105 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXN3O00409 RNU6-1068P-201ENST00000410958 103 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 CYCSP19-201ENST00000411715 316 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXN3O00409 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXN3O00409 SEPT14P3-201ENST00000439401 183 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 Z82210.1-201ENST00000440037 231 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 AL732372.2-207ENST00000445840 183 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 AC073415.1-201ENST00000449240 153 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 MRPS31P2-201ENST00000451581 518 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 SEPT14P2-201ENST00000453405 183 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 RNU6-261P-201ENST00000459506 102 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 RPL21P8-201ENST00000465083 535 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 HMGN2P13-201ENST00000476476 274 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 AC026784.1-201ENST00000507986 352 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 MTND4LP22-201ENST00000508209 276 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 SEPT14P4-201ENST00000513445 186 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 APOOP4-201ENST00000513530 597 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 AC105417.1-201ENST00000514691 285 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 RNU6-914P-201ENST00000516749 109 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 SNORA20.3-201ENST00000516880 132 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXN3O00409 FO082796.1-201ENST00000523795 183 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXN3O00409 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXN3O00409 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
FOXN3O00409 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXN3O00409 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXN3O00409 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXN3O00409 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXN3O00409 AC104260.1-201ENST00000616660 539 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 AC010338.1-201ENST00000621823 717 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 MIR3662-201ENST00000637030 95 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXN3O00409 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.77□□□□□ -1.81
FOXN3O00409 MTND4P14-201ENST00000435799 1354 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 MTND4P12-201ENST00000498999 1377 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXN3O00409 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXN3O00409 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXN3O00409 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXN3O00409 RNU6-552P-201ENST00000362869 119 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXN3O00409 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
FOXN3O00409 RNU6-550P-201ENST00000391057 101 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 RNU6-387P-201ENST00000411331 105 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 RAB9AP3-201ENST00000412737 573 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXN3O00409 AC080125.1-201ENST00000414888 684 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 OR6C66P-201ENST00000414917 930 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 SYF2P2-201ENST00000417620 583 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 RPL7P46-201ENST00000425129 740 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.76□□□□□ -1.81
FOXN3O00409 RPL36AP53-201ENST00000432891 316 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXN3O00409 AL357552.1-201ENST00000445254 415 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 UBE2V1P7-201ENST00000446395 340 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 RAB9AP1-201ENST00000449393 573 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms