Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AL513477.1-202ENST00000417061 214 ntBASIC3□□□□□ -1.93
O00370 BX295541.1-201ENST00000417774 250 ntBASIC3□□□□□ -1.93
O00370 AC093106.2-201ENST00000428212 385 ntBASIC3□□□□□ -1.93
O00370 AL512844.2-201ENST00000433990 593 ntBASIC3□□□□□ -1.93
O00370 AC104850.1-201ENST00000435940 476 ntBASIC3□□□□□ -1.93
O00370 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3□□□□□ -1.93
O00370 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3□□□□□ -1.93
O00370 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3□□□□□ -1.93
O00370 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3□□□□□ -1.93
O00370 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3□□□□□ -1.93
O00370 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3□□□□□ -1.93
O00370 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3□□□□□ -1.93
O00370 RNU6-420P-201ENST00000458780 107 ntBASIC3□□□□□ -1.93
O00370 TTC39CP1-201ENST00000512513 755 ntBASIC3□□□□□ -1.93
O00370 RNU6-826P-201ENST00000516827 104 ntBASIC3□□□□□ -1.93
O00370 RNU2-46P-201ENST00000517038 113 ntBASIC3□□□□□ -1.93
O00370 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3□□□□□ -1.93
O00370 HMGB1P14-201ENST00000557424 591 ntBASIC3□□□□□ -1.93
O00370 NDUFAF4P1-201ENST00000559425 519 ntBASIC3□□□□□ -1.93
O00370 AC012213.3-201ENST00000577199 777 ntBASIC3□□□□□ -1.93
O00370 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3□□□□□ -1.93
O00370 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3□□□□□ -1.93
O00370 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3□□□□□ -1.93
O00370 DLEU2_1.1-201ENST00000612089 120 ntBASIC3□□□□□ -1.93
O00370 AC135507.2-201ENST00000612443 309 ntBASIC3□□□□□ -1.93
O00370 UBE2Q2P2-203ENST00000613592 761 ntBASIC3□□□□□ -1.93
O00370 DLEU2_1.2-201ENST00000614667 120 ntBASIC3□□□□□ -1.93
O00370 uc_338.12-201ENST00000616344 181 ntBASIC3□□□□□ -1.93
O00370 AC092593.1-201ENST00000515413 1815 ntBASIC3□□□□□ -1.93
O00370 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3□□□□□ -1.93
O00370 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
O00370 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3□□□□□ -1.93
O00370 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3□□□□□ -1.93
O00370 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.99□□□□□ -1.93
O00370 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
O00370 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
O00370 RPL9P7-201ENST00000330965 580 ntBASIC2.99□□□□□ -1.93
O00370 U8.3-201ENST00000363321 132 ntBASIC2.99□□□□□ -1.93
O00370 Y_RNA.559-201ENST00000384686 107 ntBASIC2.99□□□□□ -1.93
O00370 RN7SKP140-201ENST00000411196 284 ntBASIC2.99□□□□□ -1.93
O00370 C1DP2-201ENST00000418167 426 ntBASIC2.99□□□□□ -1.93
O00370 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.99□□□□□ -1.93
O00370 RPL31P35-201ENST00000431058 377 ntBASIC2.99□□□□□ -1.93
O00370 FCF1P1-201ENST00000432690 571 ntBASIC2.99□□□□□ -1.93
O00370 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.99□□□□□ -1.93
O00370 AL353706.1-201ENST00000436728 494 ntBASIC2.99□□□□□ -1.93
O00370 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.99□□□□□ -1.93
O00370 MTND1P29-201ENST00000448112 647 ntBASIC2.99□□□□□ -1.93
O00370 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.99□□□□□ -1.93
O00370 AL590639.1-201ENST00000456484 337 ntBASIC2.99□□□□□ -1.93
O00370 SNORD42A-201ENST00000459584 64 ntBASIC2.99□□□□□ -1.93
O00370 AC003982.1-202ENST00000469928 248 ntBASIC2.99□□□□□ -1.93
O00370 LARP1BP2-201ENST00000486594 519 ntBASIC2.99□□□□□ -1.93
O00370 ARL2BPP4-201ENST00000506854 471 ntBASIC2.99□□□□□ -1.93
O00370 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.99□□□□□ -1.93
O00370 AC093012.1-202ENST00000549403 582 ntBASIC2.99□□□□□ -1.93
O00370 ARL2BPP2-201ENST00000550907 489 ntBASIC2.99□□□□□ -1.93
O00370 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.99□□□□□ -1.93
O00370 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.99□□□□□ -1.93
O00370 RPL23AP84-201ENST00000571193 464 ntBASIC2.99□□□□□ -1.93
O00370 MTCYBP33-201ENST00000575007 1130 ntBASIC2.99□□□□□ -1.93
O00370 MTND1P15-201ENST00000579262 949 ntBASIC2.99□□□□□ -1.93
O00370 MIR3682-201ENST00000581338 84 ntBASIC2.99□□□□□ -1.93
O00370 MIR4293-201ENST00000584305 78 ntBASIC2.99□□□□□ -1.93
O00370 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.99□□□□□ -1.93
O00370 AL359198.2-201ENST00000611836 194 ntBASIC2.99□□□□□ -1.93
O00370 SNHG22-203ENST00000617833 660 ntBASIC2.99□□□□□ -1.93
O00370 AL589994.2-201ENST00000621124 579 ntBASIC2.99□□□□□ -1.93
O00370 AC092656.1-203ENST00000624134 423 ntBASIC2.99□□□□□ -1.93
O00370 AC068880.5-201ENST00000624331 290 ntBASIC2.99□□□□□ -1.93
O00370 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.99□□□□□ -1.93
O00370 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
O00370 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
O00370 SNORD56.5-201ENST00000364281 72 ntBASIC2.98□□□□□ -1.93
O00370 SNORA20.2-201ENST00000383922 131 ntBASIC2.98□□□□□ -1.93
O00370 SNORA75-201ENST00000384158 137 ntBASIC2.98□□□□□ -1.93
O00370 RNU6-348P-201ENST00000384386 107 ntBASIC2.98□□□□□ -1.93
O00370 RNU2-36P-201ENST00000410361 191 ntBASIC2.98□□□□□ -1.93
O00370 RNU2-8P-201ENST00000410727 190 ntBASIC2.98□□□□□ -1.93
O00370 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.98□□□□□ -1.93
O00370 RPL7P37-201ENST00000425095 738 ntBASIC2.98□□□□□ -1.93
O00370 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.98□□□□□ -1.93
O00370 RPS20P5-201ENST00000434808 360 ntBASIC2.98□□□□□ -1.93
O00370 RPL36AP6-201ENST00000435770 321 ntBASIC2.98□□□□□ -1.93
O00370 TAAR7P-201ENST00000436141 242 ntBASIC2.98□□□□□ -1.93
O00370 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.98□□□□□ -1.93
O00370 AC107083.1-201ENST00000439643 279 ntBASIC2.98□□□□□ -1.93
O00370 PGBD4P3-201ENST00000440731 581 ntBASIC2.98□□□□□ -1.93
O00370 AC009296.1-201ENST00000443146 155 ntBASIC2.98□□□□□ -1.93
O00370 MTATP6P30-201ENST00000443540 664 ntBASIC2.98□□□□□ -1.93
O00370 MTCO2P7-201ENST00000446518 666 ntBASIC2.98□□□□□ -1.93
O00370 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.98□□□□□ -1.93
O00370 GAPDHP17-201ENST00000449858 1001 ntBASIC2.98□□□□□ -1.93
O00370 RPS20P20-201ENST00000460498 340 ntBASIC2.98□□□□□ -1.93
O00370 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.98□□□□□ -1.93
O00370 RAP1BP2-201ENST00000478270 544 ntBASIC2.98□□□□□ -1.93
O00370 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.98□□□□□ -1.93
O00370 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
O00370 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.98□□□□□ -1.93
O00370 AC091826.1-201ENST00000514065 313 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms