Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 RNA5SP119-201ENST00000362715 117 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 Y_RNA.58-201ENST00000362807 102 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 Y_RNA.154-201ENST00000363624 102 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 RNU6-283P-201ENST00000364788 107 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 Y_RNA.301-201ENST00000364990 103 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 RNY3P1-201ENST00000365085 102 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 RNY3-201ENST00000365484 102 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 Y_RNA.399-201ENST00000383955 105 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 Y_RNA.474-201ENST00000384341 102 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 Y_RNA.490-201ENST00000384413 102 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 SNORD70.1-201ENST00000391007 85 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 EIF4E2P1-201ENST00000393781 255 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 FAT1P1-201ENST00000406588 507 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 AC080125.1-201ENST00000414888 684 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 AL591212.2-201ENST00000433923 257 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 NDUFA5P4-201ENST00000436704 385 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 HMGB3P11-201ENST00000440127 604 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 PRDX3P3-201ENST00000447765 522 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 HMGB3P30-201ENST00000457863 606 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 Vault.1-201ENST00000516474 102 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 MIR2114-201ENST00000516645 80 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 AC090136.1-201ENST00000520009 240 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 SNRPGP16-201ENST00000533275 226 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 KLKP1-201ENST00000595979 403 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 AC022893.3-201ENST00000607665 437 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 AL391261.4-201ENST00000616012 481 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 AC103705.1-201ENST00000619013 241 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 AC012314.7-201ENST00000619693 93 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 C2orf27A-204ENST00000623058 969 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 AC073073.2-201ENST00000609827 2578 ntBASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPDC1A2A3K4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 MFSD8-236ENST00000641509 4050 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 Y_RNA.67-201ENST00000362870 100 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 RNA5SP51-201ENST00000364750 119 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 RNU6-393P-201ENST00000384475 107 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 RPS12P24-201ENST00000412619 387 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 RPS29P4-201ENST00000414733 161 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 HSPD1P21-201ENST00000436541 245 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 USP9YP7-201ENST00000436723 430 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 USP9YP32-201ENST00000452432 430 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 RPL23AP31-201ENST00000456160 467 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 RPL7P49-201ENST00000471402 708 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 MTCO1P29-201ENST00000496868 288 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 TRBVA-201ENST00000498804 316 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 HIGD1AP13-201ENST00000509878 289 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 RN7SKP18-201ENST00000516005 275 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 RNU6-927P-201ENST00000516199 100 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 Y_RNA.701-201ENST00000516812 110 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 IGKV2D-23-201ENST00000518179 286 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 HPRT1P3-201ENST00000539521 576 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 AC113139.1-201ENST00000605049 239 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 U2.17-201ENST00000611454 95 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 uc_338.15-201ENST00000615470 191 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 AC244205.2-202ENST00000635781 342 ntBASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPDC1A2A3K4 MTND4P23-201ENST00000447723 1363 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 MIR208A-201ENST00000362287 71 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 SNORA63.1-201ENST00000362493 131 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 SNORD46.1-201ENST00000364139 104 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 SNORA70.4-201ENST00000365509 134 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 Y_RNA.384-201ENST00000383909 102 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms