Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TLK1P1-201ENST00000456760 2440 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
SHISA3A0PJX4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SHISA3A0PJX4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHISA3A0PJX4 AL022322.2-201ENST00000624072 20397 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHISA3A0PJX4 OR51H2P-202ENST00000641424 3046 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 RLIMP1-201ENST00000339626 1680 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AL391987.6-201ENST00000305671 199 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 SNORA17.1-201ENST00000362945 126 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 RNY1-201ENST00000364228 113 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 RNU5E-7P-201ENST00000365290 117 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 MIR124-3-201ENST00000384866 87 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 SNORD58.1-201ENST00000391313 66 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 RPL21P75-201ENST00000396599 483 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 RPL21P28-201ENST00000401418 483 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 MRPL35P1-201ENST00000404272 572 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AL590556.1-201ENST00000423231 483 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AC007919.1-201ENST00000429380 217 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AC092798.1-201ENST00000458542 409 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 RPL21P11-201ENST00000461458 483 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 RPL21P39-201ENST00000463605 483 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 RN7SL41P-201ENST00000476144 297 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AC087190.1-201ENST00000484462 480 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AC107032.1-201ENST00000485945 480 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AC132942.1-201ENST00000486753 483 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AC093591.1-201ENST00000491435 481 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 RPL21P16-201ENST00000495531 483 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 RNU7-175P-201ENST00000515915 61 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 Y_RNA.706-201ENST00000516933 99 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AC100770.1-201ENST00000532310 322 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AC051619.2-201ENST00000559063 397 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AC023575.1-201ENST00000580510 358 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 OR7E18P-201ENST00000592589 702 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 RPL23AP78-201ENST00000599928 470 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 MIR376A1-201ENST00000616574 68 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 SCARNA4-202ENST00000625402 129 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 U4.7-201ENST00000638126 106 ntBASIC4.13□□□□□ -1.75
SHISA3A0PJX4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHISA3A0PJX4 MAPK10-303ENST00000641324 3959 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 RNU1-108P-201ENST00000362556 161 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 SNORD27-201ENST00000363981 72 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 MIR105-2-201ENST00000385083 81 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 AL590762.2-201ENST00000395798 571 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 MIR1178-201ENST00000408396 91 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 BX510359.3-201ENST00000422168 306 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 PIGPP3-201ENST00000425307 415 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 AC007560.1-201ENST00000426912 237 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 AC091286.1-201ENST00000431233 461 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 MTCO3P29-201ENST00000432119 779 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 RPL23AP56-201ENST00000460778 453 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 AC097484.1-201ENST00000471148 389 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 COPS8P2-201ENST00000473228 627 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 COX6B1P5-201ENST00000509843 249 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 RNU6-572P-201ENST00000516724 80 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 SNORA81.3-201ENST00000517283 198 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 AP002770.2-201ENST00000543613 532 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 SYF2P1-201ENST00000550658 413 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 MTND6P33-201ENST00000571794 183 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms