Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 SNRPFP3-201ENST00000457792 225 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-333P-201ENST00000459117 107 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 RPL21P8-201ENST00000465083 535 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 RPL31P60-201ENST00000478450 367 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 FCF1P8-201ENST00000510322 597 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 AL137161.1-201ENST00000532231 390 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 AC006557.5-201ENST00000603126 811 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 AC022893.3-201ENST00000607665 437 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 uc_338.1-201ENST00000612113 180 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 AC092794.2-201ENST00000620933 563 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 AL034408.1-202ENST00000636088 415 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 AL672296.1-201ENST00000427780 2158 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 NACAP2-201ENST00000318548 624 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 RNU4-20P-201ENST00000365601 151 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 Y_RNA.534-201ENST00000384599 112 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-876P-201ENST00000391295 104 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 U3.42-201ENST00000408746 214 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AC009237.5-201ENST00000414271 501 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AC080125.1-201ENST00000414888 684 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AL590383.1-201ENST00000428602 75 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AL591704.1-201ENST00000432574 275 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AL591212.2-201ENST00000433923 257 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 CST9LP2-201ENST00000437612 320 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 RPS24P13-201ENST00000442520 397 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 HMGB3P8-201ENST00000449709 577 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AC115115.1-201ENST00000449927 248 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 FABP5P13-201ENST00000452144 328 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 MTND3P16-201ENST00000452205 344 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 HMGN2P16-201ENST00000456802 261 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 RPS4XP13-201ENST00000483219 789 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AC068587.1-201ENST00000483613 781 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AC018710.1-201ENST00000506509 158 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 RNU1-45P-201ENST00000517191 141 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AC007458.1-201ENST00000542812 373 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 BNIP3P10-201ENST00000605360 577 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AL110115.1-201ENST00000614396 364 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 SNORD39.4-201ENST00000620099 78 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 CR392039.5-201ENST00000623201 510 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AC073476.4-201ENST00000628409 72 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 MTND1P37-201ENST00000636562 264 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 MTND4P14-201ENST00000435799 1354 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 AC090740.1-201ENST00000623193 2262 ntBASIC3.35□□□□□ -1.87
TCRBV7S3A2A0A539 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-1167P-201ENST00000363227 94 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 SNORA72.1-201ENST00000363485 129 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-288P-201ENST00000363690 104 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 Y_RNA.231-201ENST00000364358 102 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-867P-201ENST00000364956 107 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-741P-201ENST00000383889 107 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AL356776.1-201ENST00000406574 447 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AL606923.1-201ENST00000406616 190 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 RNU2-33P-201ENST00000410344 192 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 RNA5SP44-201ENST00000410446 133 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AC245291.1-201ENST00000419501 328 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 RPL23AP22-201ENST00000437556 453 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AC009237.8-201ENST00000445492 379 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 RN7SL542P-201ENST00000467147 294 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 RPL21P13-201ENST00000488305 481 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms