Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RNU6-271P-201ENST00000363858 105 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 RNU1-57P-201ENST00000384491 166 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 MIR597-201ENST00000384968 97 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 RNU11-3P-201ENST00000391111 133 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 NDUFS5P4-201ENST00000412983 318 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 SSXP1-201ENST00000453640 473 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 MTCYBP18-201ENST00000501056 747 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 RPL38P4-201ENST00000502376 214 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 RNU4-29P-201ENST00000515943 174 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 SNORA48.9-201ENST00000516419 162 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 RNU6-250P-201ENST00000516958 103 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 AP003033.1-201ENST00000527244 415 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 AC124293.1-201ENST00000530034 493 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 AC004492.1-201ENST00000607036 742 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 AP005229.2-201ENST00000609980 697 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 MIR6886-201ENST00000619864 61 ntBASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.57□□□□□ -2.32
LINC01558Q9Y6Z2 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 OR5T3-201ENST00000303059 1023 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC062016.1-201ENST00000355719 319 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 SNORA51.1-201ENST00000363243 140 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 RNU1-23P-201ENST00000363361 144 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 RNU6-1222P-201ENST00000384615 107 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AL031679.1-201ENST00000400616 525 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 RNA5SP184-201ENST00000411071 108 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AL356320.1-201ENST00000429616 163 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 RPL32P28-201ENST00000443577 397 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 PRPS1P1-201ENST00000445305 876 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 RNU1-123P-201ENST00000458950 160 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC008481.1-201ENST00000463278 396 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 RPS26P55-201ENST00000471178 356 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC021382.1-201ENST00000483523 359 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC092902.1-201ENST00000486999 259 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC011352.3-201ENST00000505162 593 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC025465.3-201ENST00000510570 311 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 SNORA25.11-201ENST00000515935 105 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AP005660.1-201ENST00000522972 293 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AP001646.1-201ENST00000527936 915 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 OR5B19P-201ENST00000531766 928 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC006199.1-201ENST00000548728 219 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AL132857.1-201ENST00000555180 708 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC009063.1-201ENST00000563342 702 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 MIR3167-201ENST00000579623 85 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 MIR4325-201ENST00000583049 90 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 BNIP3P23-201ENST00000599655 511 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC091152.3-201ENST00000604227 325 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC092953.2-201ENST00000608000 699 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC004067.1-201ENST00000608733 700 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AL355472.4-201ENST00000610233 626 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 RMST_6.1-201ENST00000611980 203 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 DUSP12P1-201ENST00000612874 516 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 MTND1P37-201ENST00000636562 264 ntBASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC0.56□□□□□ -2.32
LINC01558Q9Y6Z2 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 RNA5SP327-201ENST00000362494 101 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 RNA5SP479-201ENST00000364858 117 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 SNORA67.6-201ENST00000391093 99 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 BTF3P4-201ENST00000418852 495 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 RPS27P16-201ENST00000425758 201 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AL109933.2-201ENST00000452651 260 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AC018437.1-201ENST00000492214 406 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 BOLA3P3-201ENST00000505182 232 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms