Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AC099669.2-201ENST00000616549 437 ntBASIC4.88□□□□□ -1.63
GPC6Q9Y625 AC015914.2-201ENST00000618167 288 ntBASIC4.88□□□□□ -1.63
GPC6Q9Y625 MIR6837-201ENST00000620884 64 ntBASIC4.88□□□□□ -1.63
GPC6Q9Y625 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC6Q9Y625 TLK1P1-201ENST00000456760 2440 ntBASIC4.88□□□□□ -1.63
GPC6Q9Y625 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GPC6Q9Y625 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.88□□□□□ -1.63
GPC6Q9Y625 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC6Q9Y625 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC6Q9Y625 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
GPC6Q9Y625 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
GPC6Q9Y625 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GPC6Q9Y625 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
GPC6Q9Y625 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GPC6Q9Y625 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 RN7SKP160-201ENST00000363804 340 ntBASIC4.87□□□□□ -1.63
GPC6Q9Y625 Y_RNA.286-201ENST00000364813 102 ntBASIC4.87□□□□□ -1.63
GPC6Q9Y625 RNU4-9P-201ENST00000364951 139 ntBASIC4.87□□□□□ -1.63
GPC6Q9Y625 RNA5SP223-201ENST00000365174 120 ntBASIC4.87□□□□□ -1.63
GPC6Q9Y625 RNU6-21P-201ENST00000384710 107 ntBASIC4.87□□□□□ -1.63
GPC6Q9Y625 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 AL358453.1-201ENST00000422522 250 ntBASIC4.87□□□□□ -1.63
GPC6Q9Y625 AL353705.4-201ENST00000449661 238 ntBASIC4.87□□□□□ -1.63
GPC6Q9Y625 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 AC013470.1-201ENST00000453438 462 ntBASIC4.87□□□□□ -1.63
GPC6Q9Y625 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 AC004980.4-201ENST00000513375 203 ntBASIC4.87□□□□□ -1.63
GPC6Q9Y625 SNORA31.18-201ENST00000517043 134 ntBASIC4.87□□□□□ -1.63
GPC6Q9Y625 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
GPC6Q9Y625 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 AP000542.2-201ENST00000623199 6179 ntBASIC4.87□□□□□ -1.63
GPC6Q9Y625 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.87□□□□□ -1.63
GPC6Q9Y625 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GPC6Q9Y625 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GPC6Q9Y625 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GPC6Q9Y625 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
GPC6Q9Y625 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GPC6Q9Y625 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.86□□□□□ -1.63
GPC6Q9Y625 SNORA25.1-201ENST00000362326 128 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 Y_RNA.304-201ENST00000365011 112 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 RNY4P28-201ENST00000365281 93 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 RNU6-968P-201ENST00000384076 107 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 RNU6-514P-201ENST00000384208 107 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 RNA5SP339-201ENST00000390987 122 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 RN7SKP16-201ENST00000410180 299 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.86□□□□□ -1.63
GPC6Q9Y625 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.86□□□□□ -1.63
GPC6Q9Y625 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.86□□□□□ -1.63
GPC6Q9Y625 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.86□□□□□ -1.63
GPC6Q9Y625 AC005002.2-201ENST00000438228 269 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 AC009296.1-201ENST00000443146 155 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.86□□□□□ -1.63
GPC6Q9Y625 RPL23AP81-201ENST00000455252 467 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 RPL23AP65-201ENST00000475608 468 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 OR2AO1P-201ENST00000476497 403 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.86□□□□□ -1.63
GPC6Q9Y625 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GPC6Q9Y625 RNU7-110P-201ENST00000516891 62 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 RNU2-31P-201ENST00000516954 155 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 RNA5SP373-201ENST00000517271 95 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 AC072026.1-201ENST00000605023 201 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.86□□□□□ -1.63
GPC6Q9Y625 AL079305.1-201ENST00000623159 3008 ntBASIC4.86□□□□□ -1.63
GPC6Q9Y625 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GPC6Q9Y625 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
GPC6Q9Y625 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
GPC6Q9Y625 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
GPC6Q9Y625 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GPC6Q9Y625 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
GPC6Q9Y625 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GPC6Q9Y625 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GPC6Q9Y625 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GPC6Q9Y625 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
GPC6Q9Y625 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
GPC6Q9Y625 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GPC6Q9Y625 RNU6-923P-201ENST00000364753 107 ntBASIC4.85□□□□□ -1.63
GPC6Q9Y625 RNU6-804P-201ENST00000384286 107 ntBASIC4.85□□□□□ -1.63
GPC6Q9Y625 RNU6-166P-201ENST00000384371 107 ntBASIC4.85□□□□□ -1.63
GPC6Q9Y625 MIR32-201ENST00000384965 70 ntBASIC4.85□□□□□ -1.63
GPC6Q9Y625 RNU1-77P-201ENST00000390868 162 ntBASIC4.85□□□□□ -1.63
GPC6Q9Y625 RNU6-651P-201ENST00000411040 105 ntBASIC4.85□□□□□ -1.63
GPC6Q9Y625 AL451074.5-201ENST00000415894 435 ntBASIC4.85□□□□□ -1.63
GPC6Q9Y625 EIF1P2-201ENST00000428233 350 ntBASIC4.85□□□□□ -1.63
GPC6Q9Y625 DNAJC19P7-201ENST00000428811 344 ntBASIC4.85□□□□□ -1.63
GPC6Q9Y625 AC009238.2-201ENST00000431026 355 ntBASIC4.85□□□□□ -1.63
GPC6Q9Y625 AL078601.1-201ENST00000444542 271 ntBASIC4.85□□□□□ -1.63
GPC6Q9Y625 ANP32BP2-201ENST00000454525 545 ntBASIC4.85□□□□□ -1.63
GPC6Q9Y625 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms