Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 RNU1-18P-201ENST00000363062 164 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 RNA5SP252-201ENST00000391131 119 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 AL139039.1-201ENST00000401900 692 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 HIGD1AP11-201ENST00000438361 280 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 BRK1P2-201ENST00000442875 223 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 AC034236.1-201ENST00000469891 373 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 RPL23AP11-201ENST00000475260 469 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 SLC25A15P5-201ENST00000508033 253 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 RNA5SP401-201ENST00000515920 127 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 RNU4-29P-201ENST00000515943 174 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 SNORD60.2-201ENST00000516883 86 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 MTND1P35-201ENST00000526739 508 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 NACAP3-201ENST00000552100 481 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 AC068135.2-201ENST00000569293 1028 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 MIR92B-201ENST00000607575 96 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 DISC2.1-201ENST00000612827 205 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 U6.42-201ENST00000618440 107 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 AL354685.2-201ENST00000448218 1447 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 FAM35DP-201ENST00000323387 2712 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 AC010680.1-201ENST00000590024 3590 ntBASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A3BPQ9Y5P4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 RNU6-1090P-201ENST00000364065 94 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 SNORA14A-201ENST00000364773 135 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 RNU6-877P-201ENST00000383868 107 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 MIR200C-201ENST00000384980 68 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 MIR1277-201ENST00000408536 78 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 RNU6-193P-201ENST00000410977 107 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 EEF1A1P40-201ENST00000412883 573 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 AMD1P2-201ENST00000412936 992 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 AC000111.3-201ENST00000433478 193 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 MTATP6P7-201ENST00000453315 681 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 AC128713.1-201ENST00000471495 306 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 RNU1-95P-201ENST00000516357 160 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 RNU1-128P-201ENST00000516704 160 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 RN7SKP209-201ENST00000516888 304 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 MTND4P7-201ENST00000523876 130 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 AL391261.3-201ENST00000557194 520 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 SNORA59B-202ENST00000578183 701 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 MIR4444-1-201ENST00000581696 74 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 MIR4444-2-201ENST00000584390 74 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 NRBF2P5-201ENST00000603087 788 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 AL161629.2-201ENST00000615347 275 ntBASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.17□□□□□ -1.74
COL4A3BPQ9Y5P4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 NACAP2-201ENST00000318548 624 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 SNORA73.2-201ENST00000364946 201 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 RNU1-73P-201ENST00000383971 164 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 SNORA5A-201ENST00000384111 134 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 MIR670-201ENST00000390142 98 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 RNA5SP424-201ENST00000390988 115 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 AL136116.1-201ENST00000403591 381 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 AL354719.1-201ENST00000406535 843 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 RNU6-908P-201ENST00000410160 94 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 SNRPEP10-201ENST00000420249 274 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 AC098614.2-201ENST00000426040 255 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 CALM1P1-201ENST00000442082 433 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 VN1R34P-201ENST00000447387 883 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 AL031183.1-201ENST00000457667 207 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 RNU7-23P-201ENST00000459465 62 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 AC139453.3-201ENST00000493276 369 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 RNU1-103P-201ENST00000516502 125 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms