Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 RNU6-1286P-201ENST00000383871 107 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 SNORD56.6-201ENST00000384569 71 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 SNORA40.19-201ENST00000390846 128 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 RNU6-1154P-201ENST00000391001 104 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 RNU2-68P-201ENST00000410878 191 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 RPL12P3-201ENST00000440080 396 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 AC073465.2-201ENST00000440938 498 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 RPSAP50-201ENST00000481955 852 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 RN7SL346P-201ENST00000491561 294 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 SCARNA20.4-201ENST00000516969 131 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 MIR4423-201ENST00000580922 80 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 AC126915.2-201ENST00000610957 190 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 AC099669.2-201ENST00000616549 437 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 MIR6133-201ENST00000617057 108 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 AC099506.2-201ENST00000623074 221 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 AL359693.1-201ENST00000614959 2407 ntBASIC4.92□□□□□ -1.62
HRH3Q9Y5N1 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 AL079305.1-201ENST00000623159 3008 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 RBBP8P1-201ENST00000449447 1844 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 RNU6-626P-201ENST00000363354 107 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 RNU6-105P-201ENST00000363909 104 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 Y_RNA.230-201ENST00000364348 109 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 RNU1-43P-201ENST00000365052 165 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 RNA5SP235-201ENST00000365411 114 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 RNU6-142P-201ENST00000384019 107 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 RNU1-106P-201ENST00000384382 164 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 U3.39-201ENST00000408569 239 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 Z85995.1-201ENST00000415547 335 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 RPS27P18-201ENST00000431701 247 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 RPL7AP6-201ENST00000477943 801 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 AC139453.3-201ENST00000493276 369 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 AC108043.1-201ENST00000512696 574 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 RNA5SP165-201ENST00000517142 115 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 RNU4-60P-201ENST00000517239 135 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 AC107016.1-201ENST00000550463 337 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 AP002826.1-201ENST00000608835 315 ntBASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HRH3Q9Y5N1 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.9□□□□□ -1.62
HRH3Q9Y5N1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
HRH3Q9Y5N1 ABCC13-202ENST00000463099 3842 ntBASIC4.9□□□□□ -1.62
HRH3Q9Y5N1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HRH3Q9Y5N1 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HRH3Q9Y5N1 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.9□□□□□ -1.62
HRH3Q9Y5N1 Y_RNA.262-201ENST00000364641 102 ntBASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 RNU6-72P-201ENST00000384285 79 ntBASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 Y_RNA.497-201ENST00000384447 98 ntBASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 TBCAP2-201ENST00000416175 326 ntBASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 AC098614.2-201ENST00000426040 255 ntBASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 RNA5SP103-201ENST00000459503 118 ntBASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 AL132838.2-201ENST00000492041 314 ntBASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 RNU6-1219P-201ENST00000516143 112 ntBASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 SCARNA16.4-201ENST00000516956 187 ntBASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 AC053481.4-201ENST00000583164 216 ntBASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 AC131238.1-201ENST00000617135 328 ntBASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 AC068870.2-201ENST00000620635 389 ntBASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 U6.99-201ENST00000637524 83 ntBASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms