Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RPL23AP53-201ENST00000521854 457 ntBASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 MIR5688-201ENST00000580619 83 ntBASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 MIR6793-201ENST00000612376 63 ntBASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 AL121890.5-201ENST00000620848 304 ntBASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 AL359955.1-201ENST00000455242 3275 ntBASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 CENPCP1-201ENST00000533085 2578 ntBASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 AC018555.1-201ENST00000567548 1980 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 Y_RNA.280-201ENST00000364765 112 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 Y_RNA.558-201ENST00000384685 113 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 AL592291.1-201ENST00000403830 352 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 MIR1203-201ENST00000408812 85 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 AC245096.1-201ENST00000413104 546 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 RPL26P27-201ENST00000414397 437 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 AL035660.1-201ENST00000422041 222 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 FTH1P6-201ENST00000430768 320 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 AL135790.2-201ENST00000437701 267 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 AC064862.4-201ENST00000442180 334 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 FTLP8-201ENST00000446770 267 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 HMGB3P8-201ENST00000449709 577 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 AL445665.1-202ENST00000452436 324 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 ATP5LP3-201ENST00000514223 304 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 RNU6-561P-201ENST00000516222 102 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 AP004607.1-201ENST00000524456 203 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 MIR4489-201ENST00000578869 62 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 OR7E18P-201ENST00000592589 702 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 AC004832.5-201ENST00000608677 401 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 uc_338.28-201ENST00000612082 187 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 AP005431.1-201ENST00000618479 319 ntBASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHGA4Q9Y5G9 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 SNORA72.4-201ENST00000384174 132 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 MIR143-201ENST00000385300 106 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 MT-TT-201ENST00000387460 66 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 AL606845.1-201ENST00000404881 255 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 MIR1178-201ENST00000408396 91 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 RN7SKP293-201ENST00000411389 296 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 Z85995.1-201ENST00000415547 335 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 AC096649.2-201ENST00000416186 393 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 RN7SL352P-201ENST00000466002 277 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 AC006539.1-201ENST00000481419 501 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 RPS4XP13-201ENST00000483219 789 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 AC124945.1-201ENST00000485133 188 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 AL132838.2-201ENST00000492041 314 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 RNA5SP362-201ENST00000516048 118 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 AC090971.4-201ENST00000560291 1800 ntBASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
PCDHGA4Q9Y5G9 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 AC069528.2-201ENST00000624849 1991 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms