Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHGA9Q9Y5G4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PCDHGA9Q9Y5G4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
PCDHGA9Q9Y5G4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHGA9Q9Y5G4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
PCDHGA9Q9Y5G4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
PCDHGA9Q9Y5G4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 RNA5SP295-201ENST00000362655 121 ntBASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 RNU6-1179P-201ENST00000384667 107 ntBASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 MIR325-201ENST00000385260 98 ntBASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 RPS4XP3-201ENST00000398541 413 ntBASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 AL353621.1-201ENST00000418219 243 ntBASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 BRK1P2-201ENST00000442875 223 ntBASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 RNU4-49P-201ENST00000516080 140 ntBASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 RNU7-30P-201ENST00000516835 62 ntBASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 AC011602.1-201ENST00000546484 331 ntBASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 FTX_3.1-201ENST00000610451 147 ntBASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 AC007546.1-201ENST00000619452 559 ntBASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA9Q9Y5G4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 LINC02471-203ENST00000641941 4752 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 Y_RNA.167-201ENST00000363735 109 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 SNORD81.2-201ENST00000365153 76 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 MIR578-201ENST00000384828 96 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 MIR200C-201ENST00000384980 68 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 RPL21P17-201ENST00000397467 475 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 RPS4XP7-201ENST00000406274 780 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 RNU6-607P-201ENST00000411283 108 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 RPS29P7-201ENST00000439662 171 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 PPIAP15-201ENST00000479662 484 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 RPL32P34-201ENST00000486380 400 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 MTCO1P29-201ENST00000496868 288 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 AL606490.9-201ENST00000603331 271 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 AL645944.1-201ENST00000603857 493 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 AL160290.3-201ENST00000604869 165 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 Z98200.1-201ENST00000607298 470 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 MIR4727-201ENST00000622232 55 ntBASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA9Q9Y5G4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 SNORD6-201ENST00000365444 73 ntBASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 RNU6-1035P-201ENST00000384477 107 ntBASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 RNU6-831P-201ENST00000384548 107 ntBASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 BX323014.1-201ENST00000412876 237 ntBASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 TOMM20P4-201ENST00000427861 435 ntBASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 AC018644.1-201ENST00000429934 551 ntBASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 AL360271.2-201ENST00000447710 161 ntBASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 AL590664.1-201ENST00000448065 339 ntBASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 AL133547.1-201ENST00000448546 220 ntBASIC3.87□□□□□ -1.79
PCDHGA9Q9Y5G4 CEACAMP4-201ENST00000457676 421 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms