Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AL133271.1-201ENST00000538229 291 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC243972.3-201ENST00000539655 198 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AL133153.1-201ENST00000557756 303 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC012182.1-201ENST00000570133 895 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 COX6CP3-201ENST00000580869 223 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 VN1R80P-201ENST00000597126 338 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC007566.2-201ENST00000603642 413 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC096577.2-201ENST00000611455 153 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC009248.2-201ENST00000619826 254 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AL136313.1-201ENST00000624804 202 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 MTND1P37-201ENST00000636562 264 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AP000553.6-201ENST00000641242 118 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
PCDHGB1Q9Y5G3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 NACAP2-201ENST00000318548 624 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU4-48P-201ENST00000365559 182 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 UBE2V1P2-201ENST00000397758 440 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AL122016.1-201ENST00000403365 367 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 Y_RNA.615-201ENST00000410769 117 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-373P-201ENST00000411247 98 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 RPL7L1P10-201ENST00000427790 463 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AC093156.1-201ENST00000440382 670 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 NOTCH2P1-201ENST00000443481 624 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AL357552.1-201ENST00000445254 415 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AC140076.1-201ENST00000449897 361 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AP002884.2-201ENST00000471647 395 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AC092436.1-201ENST00000506450 503 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AC004062.1-201ENST00000509926 645 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU7-30P-201ENST00000516835 62 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AC128657.1-201ENST00000549459 145 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 MIR4474-201ENST00000579189 78 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 MIR4293-201ENST00000584305 78 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AC005498.1-201ENST00000592125 465 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AC013553.2-201ENST00000604244 589 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AC099778.2-201ENST00000610904 211 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AC073476.4-201ENST00000628409 72 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 SNORA50A-202ENST00000629536 136 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 ZNF734P-201ENST00000419494 1534 ntBASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGB1Q9Y5G3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 MTND4P35-201ENST00000604257 1375 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AC004972.1-201ENST00000623934 2209 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 U3.11-201ENST00000364476 212 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 Y_RNA.419-201ENST00000384041 102 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 Y_RNA.474-201ENST00000384341 102 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AL356057.2-201ENST00000403318 432 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 FAT1P1-201ENST00000406588 507 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU2-36P-201ENST00000410361 191 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU2-47P-201ENST00000410649 186 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AC137499.1-201ENST00000427602 88 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AC091286.1-201ENST00000431233 461 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 DDX3P2-201ENST00000446138 111 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AL118520.1-201ENST00000450770 291 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AC233279.1-201ENST00000455300 423 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 HMGN1P18-201ENST00000457642 277 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 RPS29P15-201ENST00000458329 171 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 MRPS17P3-201ENST00000465453 385 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 HMGN1P10-201ENST00000474557 553 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AC026427.2-201ENST00000506228 536 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 SNORA64.4-201ENST00000516632 81 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms