Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.9□□□□□ -2.27
AP4S1Q9Y587 AP003497.1-201ENST00000528472 562 ntBASIC0.9□□□□□ -2.27
AP4S1Q9Y587 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.9□□□□□ -2.27
AP4S1Q9Y587 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.9□□□□□ -2.27
AP4S1Q9Y587 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.9□□□□□ -2.27
AP4S1Q9Y587 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.9□□□□□ -2.27
AP4S1Q9Y587 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.9□□□□□ -2.27
AP4S1Q9Y587 AC013553.2-201ENST00000604244 589 ntBASIC0.9□□□□□ -2.27
AP4S1Q9Y587 BNIP3P19-201ENST00000605397 577 ntBASIC0.9□□□□□ -2.27
AP4S1Q9Y587 AC008498.1-201ENST00000613012 531 ntBASIC0.9□□□□□ -2.27
AP4S1Q9Y587 AC008443.7-201ENST00000622195 246 ntBASIC0.9□□□□□ -2.27
AP4S1Q9Y587 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.9□□□□□ -2.27
AP4S1Q9Y587 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
AP4S1Q9Y587 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
AP4S1Q9Y587 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
AP4S1Q9Y587 RNU6-882P-201ENST00000391025 103 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 RPL23AP29-201ENST00000397284 453 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 U6atac.2-201ENST00000408644 118 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 RNU6-272P-201ENST00000411028 104 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AC010385.1-201ENST00000412374 256 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 EIF4EP2-201ENST00000422816 654 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AC092634.2-201ENST00000428146 1010 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AC009238.1-201ENST00000442165 424 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AC009237.6-201ENST00000446969 424 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.89□□□□□ -2.27
AP4S1Q9Y587 RPS20P24-201ENST00000457473 361 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.89□□□□□ -2.27
AP4S1Q9Y587 RNU6-202P-201ENST00000515998 96 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.89□□□□□ -2.27
AP4S1Q9Y587 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AP000873.5-201ENST00000533906 236 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.89□□□□□ -2.27
AP4S1Q9Y587 TRAV11-201ENST00000539512 339 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AC019288.1-201ENST00000557918 224 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AC105224.1-201ENST00000587055 421 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AP000403.1-201ENST00000603349 851 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AC025811.1-201ENST00000604312 472 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AL512598.1-201ENST00000610158 273 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AL353770.2-201ENST00000620024 78 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.89□□□□□ -2.27
AP4S1Q9Y587 OR4G11P-202ENST00000642116 1414 ntBASIC0.89□□□□□ -2.27
AP4S1Q9Y587 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
AP4S1Q9Y587 AC005539.1-201ENST00000443768 1479 ntBASIC0.88□□□□□ -2.27
AP4S1Q9Y587 SNORA7.1-201ENST00000363750 139 ntBASIC0.88□□□□□ -2.27
AP4S1Q9Y587 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.88□□□□□ -2.27
AP4S1Q9Y587 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.88□□□□□ -2.27
AP4S1Q9Y587 AC241584.1-201ENST00000438469 1241 ntBASIC0.88□□□□□ -2.27
AP4S1Q9Y587 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.88□□□□□ -2.27
AP4S1Q9Y587 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.88□□□□□ -2.27
AP4S1Q9Y587 AL592447.1-201ENST00000447592 540 ntBASIC0.88□□□□□ -2.27
AP4S1Q9Y587 AL590365.1-201ENST00000450788 243 ntBASIC0.88□□□□□ -2.27
AP4S1Q9Y587 snoU13.15-201ENST00000459407 104 ntBASIC0.88□□□□□ -2.27
AP4S1Q9Y587 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.88□□□□□ -2.27
AP4S1Q9Y587 AC132942.1-201ENST00000486753 483 ntBASIC0.88□□□□□ -2.27
AP4S1Q9Y587 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.88□□□□□ -2.27
AP4S1Q9Y587 SNORA4.4-201ENST00000515921 135 ntBASIC0.88□□□□□ -2.27
AP4S1Q9Y587 SNORA44.1-201ENST00000517031 108 ntBASIC0.88□□□□□ -2.27
AP4S1Q9Y587 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.88□□□□□ -2.27
AP4S1Q9Y587 AC022616.2-201ENST00000523185 300 ntBASIC0.88□□□□□ -2.27
AP4S1Q9Y587 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
AP4S1Q9Y587 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.88□□□□□ -2.27
AP4S1Q9Y587 DUSP12P1-201ENST00000612874 516 ntBASIC0.88□□□□□ -2.27
AP4S1Q9Y587 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.88□□□□□ -2.27
AP4S1Q9Y587 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
AP4S1Q9Y587 AP003485.1-201ENST00000625093 753 ntBASIC0.88□□□□□ -2.27
AP4S1Q9Y587 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.88□□□□□ -2.27
AP4S1Q9Y587 MIR618-201ENST00000385287 98 ntBASIC0.87□□□□□ -2.27
AP4S1Q9Y587 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.87□□□□□ -2.27
AP4S1Q9Y587 AC009310.1-201ENST00000414414 451 ntBASIC0.87□□□□□ -2.27
AP4S1Q9Y587 BX276092.3-201ENST00000424182 230 ntBASIC0.87□□□□□ -2.27
AP4S1Q9Y587 AL049734.2-201ENST00000441066 616 ntBASIC0.87□□□□□ -2.27
AP4S1Q9Y587 AL513124.1-201ENST00000450410 614 ntBASIC0.87□□□□□ -2.27
AP4S1Q9Y587 RNA5SP57-201ENST00000459463 123 ntBASIC0.87□□□□□ -2.27
AP4S1Q9Y587 AC138853.1-201ENST00000503549 823 ntBASIC0.87□□□□□ -2.27
AP4S1Q9Y587 OR8K4P-201ENST00000534608 872 ntBASIC0.87□□□□□ -2.27
AP4S1Q9Y587 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.87□□□□□ -2.27
AP4S1Q9Y587 AC023825.1-201ENST00000566704 1030 ntBASIC0.87□□□□□ -2.27
AP4S1Q9Y587 HMGB1P51-201ENST00000605166 638 ntBASIC0.87□□□□□ -2.27
AP4S1Q9Y587 AL137246.1-201ENST00000607072 977 ntBASIC0.87□□□□□ -2.27
AP4S1Q9Y587 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
AP4S1Q9Y587 AC006213.4-201ENST00000616184 634 ntBASIC0.87□□□□□ -2.27
AP4S1Q9Y587 AC005832.2-201ENST00000538921 1430 ntBASIC0.87□□□□□ -2.27
AP4S1Q9Y587 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.86□□□□□ -2.27
AP4S1Q9Y587 TEX21P-201ENST00000447107 1476 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
AP4S1Q9Y587 MIR1290-201ENST00000408735 78 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 RNU4-74P-201ENST00000411280 161 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 SNRPEP10-201ENST00000420249 274 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 ZDHHC20P2-201ENST00000424108 429 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 AC007742.1-201ENST00000425789 329 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.86□□□□□ -2.27
AP4S1Q9Y587 AC024082.2-201ENST00000434771 238 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 USP9YP35-201ENST00000435696 412 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 ELOCP26-201ENST00000436067 329 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 AL691517.1-201ENST00000440833 1235 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.86□□□□□ -2.27
AP4S1Q9Y587 AC009474.2-201ENST00000451383 136 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms