Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MTND4P4-201ENST00000439033 1366 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 Y_RNA.245-201ENST00000364493 95 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 SNORA18.3-201ENST00000384122 132 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 MIR181B1-201ENST00000385240 110 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 MIR767-201ENST00000390228 109 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 SNORD115.1-201ENST00000391109 76 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 NDUFS5P1-201ENST00000405668 289 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 AL358075.3-201ENST00000426289 226 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 AL135938.1-201ENST00000443141 297 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 RPL39P40-201ENST00000445481 146 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 AC126182.1-201ENST00000478134 357 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 AC233702.1-201ENST00000482905 502 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 HIGD1AP13-201ENST00000509878 289 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 AC091826.1-201ENST00000514065 313 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 RNA5SP290-201ENST00000517133 127 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 AC022634.1-201ENST00000520765 532 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 CYCSP39-201ENST00000565821 309 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 MTCO3P13-201ENST00000577757 781 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 AC005498.1-201ENST00000592125 465 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 AC025811.1-201ENST00000604312 472 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 AC121247.2-201ENST00000604776 136 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 uc_338.12-201ENST00000616344 181 ntBASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
ATG4BQ9Y4P1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
ATG4BQ9Y4P1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.98
ATG4BQ9Y4P1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.65□□□□□ -1.98
ATG4BQ9Y4P1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 RNU6-701P-201ENST00000384059 107 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 SNORD116-8-201ENST00000384365 95 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 MRPL42P2-201ENST00000403169 426 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AC006366.1-201ENST00000422002 759 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 CYCSP46-201ENST00000423569 204 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AC019097.1-201ENST00000424783 735 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 HMGB1P9-201ENST00000429856 646 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AC010153.1-201ENST00000432862 727 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 SNRPEP9-201ENST00000436794 238 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 RPS27AP8-201ENST00000452665 445 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AC003982.1-202ENST00000469928 248 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 SEM1P1-201ENST00000506694 209 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AC009901.1-201ENST00000506703 541 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AC118465.1-201ENST00000513820 1271 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 RNA5SP76-201ENST00000516277 87 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AL359212.1-201ENST00000556608 614 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AC025281.1-201ENST00000567026 265 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 Z99497.2-201ENST00000603634 310 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AL035413.2-201ENST00000604801 525 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 RNU6-87P-201ENST00000607561 108 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AC107294.1-201ENST00000609524 467 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AC025594.3-201ENST00000613068 790 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AC022079.1-201ENST00000621546 602 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AC009878.1-201ENST00000621819 340 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 AC002064.3-201ENST00000623448 346 ntBASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
ATG4BQ9Y4P1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 RNU4-21P-201ENST00000362802 126 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 RNU6-1167P-201ENST00000363227 94 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 Y_RNA.598-201ENST00000410480 95 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 NDUFS5P4-201ENST00000412983 318 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 AC119618.1-201ENST00000434191 222 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 MTND1P28-201ENST00000435623 950 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 AL513043.1-201ENST00000439124 535 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 WASF1P1-201ENST00000447560 1131 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 GSTA11P-201ENST00000452866 669 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 SNRPGP9-201ENST00000456025 225 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 SNORD97-201ENST00000459187 142 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 RPL37P6-201ENST00000460682 294 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms