Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 ELOCP30-201ENST00000447108 299 ntBASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 FABP5P15-201ENST00000453566 214 ntBASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 AC010631.1-201ENST00000474150 156 ntBASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 AC093752.1-206ENST00000511823 336 ntBASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 AC008837.2-201ENST00000513076 418 ntBASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 PRELID2P1-201ENST00000552837 301 ntBASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 AL133153.1-201ENST00000557756 303 ntBASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 AC060771.1-201ENST00000582031 164 ntBASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 MTCYBP22-201ENST00000603788 447 ntBASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 AC098826.3-201ENST00000603823 466 ntBASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 AC097655.1-201ENST00000635075 318 ntBASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.03□□□□□ -2.09
RHBDD3Q9Y3P4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
RHBDD3Q9Y3P4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 MIRLET7G-201ENST00000362280 84 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 RNA5SP240-201ENST00000365355 128 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 RNU6-748P-201ENST00000384648 107 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 MIR17-201ENST00000385012 84 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 RNU6-298P-201ENST00000390888 96 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AL591416.1-201ENST00000404015 867 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AC009963.1-201ENST00000417265 157 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 USP9YP27-201ENST00000418455 438 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 NANOGP5-201ENST00000424456 877 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AC004383.1-201ENST00000438135 289 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AC007327.1-201ENST00000447461 264 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 RNU7-59P-201ENST00000459101 61 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AC005410.1-202ENST00000460347 485 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 MTND1P16-201ENST00000465177 898 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 LINC00888-204ENST00000487386 421 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 HMGB1P36-201ENST00000487709 576 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AC018437.1-201ENST00000492214 406 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AC234781.5-201ENST00000508429 271 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AC109445.1-201ENST00000512356 383 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 RNU6-467P-201ENST00000517027 110 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AC007229.1-201ENST00000590455 412 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AC091057.3-201ENST00000602684 733 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AC007938.3-201ENST00000604965 623 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AC092574.1-201ENST00000609771 420 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AC046143.2-201ENST00000609789 160 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AC103710.1-201ENST00000610003 901 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AL158163.2-201ENST00000619110 700 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AC109809.1-201ENST00000619665 545 ntBASIC2.02□□□□□ -2.09
RHBDD3Q9Y3P4 AL136360.1-201ENST00000503377 1900 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 AC005336.3-201ENST00000623833 2679 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 AC069282.1-201ENST00000411911 526 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 Z98742.2-201ENST00000431564 187 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 RPL36AP53-201ENST00000432891 316 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 ATP5F1P1-201ENST00000433775 569 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 HMGN1P5-201ENST00000448591 263 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 ZNF886P-201ENST00000450781 723 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 SUMO2P5-201ENST00000506790 245 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 SNORA31.25-201ENST00000517242 134 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 AL121821.2-201ENST00000556081 394 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 AC009712.1-201ENST00000564938 316 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 ROCK1P1-201ENST00000573767 549 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 MIR4529-201ENST00000578110 78 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 UBE2L4-201ENST00000587688 464 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 BNIP3P19-201ENST00000605397 577 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 AF129408.1-201ENST00000608767 431 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 AC245297.2-201ENST00000610119 565 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 AC107308.1-201ENST00000615897 301 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 AL158801.5-201ENST00000623123 465 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 LINC02211-204ENST00000642024 1070 ntBASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
RHBDD3Q9Y3P4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms