Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 SMG1P6-201ENST00000532337 2930 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 AC010329.2-201ENST00000595195 2737 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 ZFRP1-201ENST00000457579 2970 ntBASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 RNU6-700P-201ENST00000391043 107 ntBASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 SNORA57.1-201ENST00000391227 145 ntBASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 HMGN1P24-201ENST00000412282 298 ntBASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 AL133384.1-201ENST00000412744 351 ntBASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 AC010618.1-201ENST00000469924 477 ntBASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 AC108751.2-201ENST00000469993 231 ntBASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 RPL23AP65-201ENST00000475608 468 ntBASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 RNU1-6P-201ENST00000516290 144 ntBASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 FKBP1BP1-201ENST00000553366 325 ntBASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 AL133153.1-201ENST00000557756 303 ntBASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 AC011944.2-201ENST00000624440 683 ntBASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 AC083843.2-201ENST00000568248 6253 ntBASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 AL450326.2-201ENST00000421913 1962 ntBASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.04□□□□□ -1.44
PDZRN3Q9UPQ7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 AC006946.1-201ENST00000429106 328 ntBASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 AC004938.1-201ENST00000438468 308 ntBASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 FHP1-201ENST00000442741 703 ntBASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 RN7SL558P-201ENST00000497468 299 ntBASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 AC113155.1-201ENST00000511141 769 ntBASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 RNU6-638P-201ENST00000516582 104 ntBASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 AC115990.1-201ENST00000526957 301 ntBASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 AC007458.1-201ENST00000542812 373 ntBASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 AC243829.7-201ENST00000633081 225 ntBASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDZRN3Q9UPQ7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 RNU4-84P-201ENST00000364200 139 ntBASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 RNU6-225P-201ENST00000384613 103 ntBASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 AL645608.4-201ENST00000423619 154 ntBASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 AL354710.1-201ENST00000453641 246 ntBASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 RN7SL41P-201ENST00000476144 297 ntBASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 RPL21P103-201ENST00000479921 488 ntBASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 AC015795.1-201ENST00000513669 327 ntBASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 RNU6-64P-201ENST00000517119 105 ntBASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 AC133555.2-201ENST00000550213 292 ntBASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 TGIF1P1-201ENST00000558095 802 ntBASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 RN7SL802P-201ENST00000577858 299 ntBASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 MIR1254-2-201ENST00000579553 63 ntBASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 CPDP1-201ENST00000579660 283 ntBASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 SNORA74C-1-201ENST00000580726 201 ntBASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 AL121932.1-201ENST00000605542 214 ntBASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDZRN3Q9UPQ7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 A2MP1-204ENST00000566278 4130 ntBASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 SNORD73B-201ENST00000364394 72 ntBASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 U3.13-201ENST00000364804 214 ntBASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 MIR539-201ENST00000365690 78 ntBASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 RN7SKP267-201ENST00000410381 285 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms